Protein–RNA interactions for Protein: Q86UP0

CDH24, Cadherin-24, humanhuman

Predictions only

Length 819 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24Q86UP0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDH24Q86UP0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.71■■■□□ 2.35
CDH24Q86UP0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC29.45■■■□□ 2.3
CDH24Q86UP0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.36■■■□□ 2.29
CDH24Q86UP0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
CDH24Q86UP0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDH24Q86UP0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDH24Q86UP0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28.62■■■□□ 2.17
CDH24Q86UP0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
CDH24Q86UP0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CDH24Q86UP0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
CDH24Q86UP0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.39■■■□□ 2.14
CDH24Q86UP0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CDH24Q86UP0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDH24Q86UP0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
CDH24Q86UP0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDH24Q86UP0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
CDH24Q86UP0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28.13■■■□□ 2.09
CDH24Q86UP0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDH24Q86UP0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.03■■■□□ 2.08
CDH24Q86UP0 AL356512.1-201ENST00000607453 1739 ntBASIC27.98■■■□□ 2.07
CDH24Q86UP0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC27.92■■■□□ 2.06
CDH24Q86UP0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
CDH24Q86UP0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
CDH24Q86UP0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC27.78■■■□□ 2.04
CDH24Q86UP0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.69■■■□□ 2.02
CDH24Q86UP0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
CDH24Q86UP0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CDH24Q86UP0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
CDH24Q86UP0 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CDH24Q86UP0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC27.55■■■□□ 2
CDH24Q86UP0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CDH24Q86UP0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC27.52■■■□□ 2
CDH24Q86UP0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC27.52■■■□□ 2
CDH24Q86UP0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
CDH24Q86UP0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
CDH24Q86UP0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC27.47■■□□□ 1.99
CDH24Q86UP0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CDH24Q86UP0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
CDH24Q86UP0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDH24Q86UP0 ZNRF2P1-201ENST00000441407 443 ntBASIC27.27■■□□□ 1.96
CDH24Q86UP0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.22■■□□□ 1.95
CDH24Q86UP0 AC006077.2-201ENST00000623591 457 ntBASIC27.2■■□□□ 1.94
CDH24Q86UP0 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDH24Q86UP0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.12■■□□□ 1.93
CDH24Q86UP0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
CDH24Q86UP0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC27.07■■□□□ 1.92
CDH24Q86UP0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDH24Q86UP0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC26.96■■□□□ 1.91
CDH24Q86UP0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDH24Q86UP0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
CDH24Q86UP0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
CDH24Q86UP0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDH24Q86UP0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDH24Q86UP0 AC015813.7-201ENST00000623294 581 ntBASIC26.73■■□□□ 1.87
CDH24Q86UP0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDH24Q86UP0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDH24Q86UP0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDH24Q86UP0 AP002365.1-201ENST00000603448 772 ntBASIC26.58■■□□□ 1.85
CDH24Q86UP0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDH24Q86UP0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.52■■□□□ 1.84
CDH24Q86UP0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDH24Q86UP0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
CDH24Q86UP0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDH24Q86UP0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.42■■□□□ 1.82
CDH24Q86UP0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CDH24Q86UP0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDH24Q86UP0 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
CDH24Q86UP0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDH24Q86UP0 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDH24Q86UP0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CDH24Q86UP0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDH24Q86UP0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.28■■□□□ 1.8
CDH24Q86UP0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.23■■□□□ 1.79
CDH24Q86UP0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDH24Q86UP0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.17■■□□□ 1.78
CDH24Q86UP0 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC26.16■■□□□ 1.78
CDH24Q86UP0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDH24Q86UP0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDH24Q86UP0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CDH24Q86UP0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.13■■□□□ 1.77
CDH24Q86UP0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.09■■□□□ 1.77
CDH24Q86UP0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CDH24Q86UP0 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26.08■■□□□ 1.76
CDH24Q86UP0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDH24Q86UP0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CDH24Q86UP0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CDH24Q86UP0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDH24Q86UP0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CDH24Q86UP0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDH24Q86UP0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDH24Q86UP0 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.02■■□□□ 1.76
CDH24Q86UP0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
CDH24Q86UP0 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26■■□□□ 1.75
CDH24Q86UP0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CDH24Q86UP0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC25.99■■□□□ 1.75
CDH24Q86UP0 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDH24Q86UP0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
CDH24Q86UP0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.97■■□□□ 1.75
CDH24Q86UP0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms