Protein–RNA interactions for Protein: Q5SZI1

LDLRAD2, Low-density lipoprotein receptor class A domain-containing protein 2, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD2Q5SZI1 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
LDLRAD2Q5SZI1 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
LDLRAD2Q5SZI1 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
LDLRAD2Q5SZI1 AL356512.1-201ENST00000607453 1739 ntBASIC27.03■■□□□ 1.92
LDLRAD2Q5SZI1 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LDLRAD2Q5SZI1 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
LDLRAD2Q5SZI1 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC26.73■■□□□ 1.87
LDLRAD2Q5SZI1 HES6-203ENST00000409160 1600 ntTSL 2 BASIC26.52■■□□□ 1.84
LDLRAD2Q5SZI1 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC26.36■■□□□ 1.81
LDLRAD2Q5SZI1 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
LDLRAD2Q5SZI1 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
LDLRAD2Q5SZI1 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC26.1■■□□□ 1.77
LDLRAD2Q5SZI1 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC26.09■■□□□ 1.77
LDLRAD2Q5SZI1 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
LDLRAD2Q5SZI1 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LDLRAD2Q5SZI1 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC25.82■■□□□ 1.72
LDLRAD2Q5SZI1 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
LDLRAD2Q5SZI1 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC25.67■■□□□ 1.7
LDLRAD2Q5SZI1 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
LDLRAD2Q5SZI1 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
LDLRAD2Q5SZI1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
LDLRAD2Q5SZI1 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC25.47■■□□□ 1.67
LDLRAD2Q5SZI1 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
LDLRAD2Q5SZI1 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
LDLRAD2Q5SZI1 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LDLRAD2Q5SZI1 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
LDLRAD2Q5SZI1 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC25.11■■□□□ 1.61
LDLRAD2Q5SZI1 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
LDLRAD2Q5SZI1 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC25.02■■□□□ 1.6
LDLRAD2Q5SZI1 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LDLRAD2Q5SZI1 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LDLRAD2Q5SZI1 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
LDLRAD2Q5SZI1 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
LDLRAD2Q5SZI1 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
LDLRAD2Q5SZI1 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
LDLRAD2Q5SZI1 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC24.86■■□□□ 1.57
LDLRAD2Q5SZI1 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LDLRAD2Q5SZI1 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LDLRAD2Q5SZI1 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
LDLRAD2Q5SZI1 INO80B-203ENST00000409917 796 ntTSL 2 BASIC24.77■■□□□ 1.56
LDLRAD2Q5SZI1 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC24.75■■□□□ 1.55
LDLRAD2Q5SZI1 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
LDLRAD2Q5SZI1 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LDLRAD2Q5SZI1 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LDLRAD2Q5SZI1 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC24.64■■□□□ 1.53
LDLRAD2Q5SZI1 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
LDLRAD2Q5SZI1 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
LDLRAD2Q5SZI1 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LDLRAD2Q5SZI1 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
LDLRAD2Q5SZI1 AC015813.7-201ENST00000623294 581 ntBASIC24.46■■□□□ 1.51
LDLRAD2Q5SZI1 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC24.42■■□□□ 1.5
LDLRAD2Q5SZI1 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
LDLRAD2Q5SZI1 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LDLRAD2Q5SZI1 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LDLRAD2Q5SZI1 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LDLRAD2Q5SZI1 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
LDLRAD2Q5SZI1 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC24.19■■□□□ 1.46
LDLRAD2Q5SZI1 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC24.18■■□□□ 1.46
LDLRAD2Q5SZI1 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LDLRAD2Q5SZI1 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC24.16■■□□□ 1.46
LDLRAD2Q5SZI1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
LDLRAD2Q5SZI1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LDLRAD2Q5SZI1 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LDLRAD2Q5SZI1 AC006077.2-201ENST00000623591 457 ntBASIC24.06■■□□□ 1.44
LDLRAD2Q5SZI1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
LDLRAD2Q5SZI1 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LDLRAD2Q5SZI1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC24.01■■□□□ 1.43
LDLRAD2Q5SZI1 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LDLRAD2Q5SZI1 ZNRF2P1-201ENST00000441407 443 ntBASIC23.97■■□□□ 1.43
LDLRAD2Q5SZI1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LDLRAD2Q5SZI1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
LDLRAD2Q5SZI1 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LDLRAD2Q5SZI1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
LDLRAD2Q5SZI1 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LDLRAD2Q5SZI1 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
LDLRAD2Q5SZI1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LDLRAD2Q5SZI1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
LDLRAD2Q5SZI1 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LDLRAD2Q5SZI1 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LDLRAD2Q5SZI1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LDLRAD2Q5SZI1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
LDLRAD2Q5SZI1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC23.68■■□□□ 1.38
LDLRAD2Q5SZI1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LDLRAD2Q5SZI1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LDLRAD2Q5SZI1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC23.67■■□□□ 1.38
LDLRAD2Q5SZI1 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
LDLRAD2Q5SZI1 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
LDLRAD2Q5SZI1 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC23.66■■□□□ 1.38
LDLRAD2Q5SZI1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
LDLRAD2Q5SZI1 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LDLRAD2Q5SZI1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
LDLRAD2Q5SZI1 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LDLRAD2Q5SZI1 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC23.58■■□□□ 1.37
LDLRAD2Q5SZI1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC23.56■■□□□ 1.36
LDLRAD2Q5SZI1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LDLRAD2Q5SZI1 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LDLRAD2Q5SZI1 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23.53■■□□□ 1.36
LDLRAD2Q5SZI1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LDLRAD2Q5SZI1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
LDLRAD2Q5SZI1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms