Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
SOX18P35713 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SOX18P35713 AL356512.1-201ENST00000607453 1739 ntBASIC31.13■■■□□ 2.57
SOX18P35713 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
SOX18P35713 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SOX18P35713 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SOX18P35713 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.72■■■□□ 2.51
SOX18P35713 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.52■■■□□ 2.48
SOX18P35713 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.43■■■□□ 2.46
SOX18P35713 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.41■■■□□ 2.46
SOX18P35713 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.24■■■□□ 2.43
SOX18P35713 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.15■■■□□ 2.42
SOX18P35713 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
SOX18P35713 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SOX18P35713 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.79■■■□□ 2.36
SOX18P35713 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
SOX18P35713 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.5■■■□□ 2.31
SOX18P35713 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
SOX18P35713 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
SOX18P35713 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
SOX18P35713 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.26■■■□□ 2.27
SOX18P35713 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
SOX18P35713 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.21■■■□□ 2.27
SOX18P35713 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.12■■■□□ 2.25
SOX18P35713 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SOX18P35713 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
SOX18P35713 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
SOX18P35713 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.23
SOX18P35713 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.93■■■□□ 2.22
SOX18P35713 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
SOX18P35713 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
SOX18P35713 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.19
SOX18P35713 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.65■■■□□ 2.18
SOX18P35713 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SOX18P35713 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SOX18P35713 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.51■■■□□ 2.15
SOX18P35713 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.51■■■□□ 2.15
SOX18P35713 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SOX18P35713 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SOX18P35713 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SOX18P35713 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SOX18P35713 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SOX18P35713 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SOX18P35713 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SOX18P35713 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
SOX18P35713 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SOX18P35713 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SOX18P35713 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.18■■■□□ 2.1
SOX18P35713 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
SOX18P35713 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.18■■■□□ 2.1
SOX18P35713 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
SOX18P35713 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
SOX18P35713 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SOX18P35713 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.11■■■□□ 2.09
SOX18P35713 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
SOX18P35713 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.08■■■□□ 2.09
SOX18P35713 AC015813.7-201ENST00000623294 581 ntBASIC27.9■■■□□ 2.06
SOX18P35713 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SOX18P35713 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SOX18P35713 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
SOX18P35713 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.79■■■□□ 2.04
SOX18P35713 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SOX18P35713 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SOX18P35713 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
SOX18P35713 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.69■■■□□ 2.02
SOX18P35713 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
SOX18P35713 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
SOX18P35713 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.61■■■□□ 2.01
SOX18P35713 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SOX18P35713 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.57■■■□□ 2
SOX18P35713 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SOX18P35713 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SOX18P35713 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SOX18P35713 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.53■■■□□ 2
SOX18P35713 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SOX18P35713 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.45■■□□□ 1.98
SOX18P35713 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
SOX18P35713 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.43■■□□□ 1.98
SOX18P35713 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SOX18P35713 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SOX18P35713 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SOX18P35713 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
SOX18P35713 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SOX18P35713 AC006077.2-201ENST00000623591 457 ntBASIC27.29■■□□□ 1.96
SOX18P35713 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SOX18P35713 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SOX18P35713 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
SOX18P35713 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SOX18P35713 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SOX18P35713 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.19■■□□□ 1.94
SOX18P35713 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SOX18P35713 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SOX18P35713 ZNRF2P1-201ENST00000441407 443 ntBASIC27.14■■□□□ 1.94
SOX18P35713 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
SOX18P35713 AC145285.7-201ENST00000614819 1539 ntBASIC27.12■■□□□ 1.93
SOX18P35713 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SOX18P35713 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SOX18P35713 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.07■■□□□ 1.92
SOX18P35713 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SOX18P35713 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms