Protein–RNA interactions for Protein: O75317

USP12, Ubiquitin carboxyl-terminal hydrolase 12, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP12O75317 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.32■■■■□ 3.08
USP12O75317 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
USP12O75317 AL356512.1-201ENST00000607453 1739 ntBASIC33.65■■■□□ 2.98
USP12O75317 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.54■■■□□ 2.96
USP12O75317 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.31■■■□□ 2.92
USP12O75317 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
USP12O75317 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.22■■■□□ 2.91
USP12O75317 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
USP12O75317 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.06■■■□□ 2.88
USP12O75317 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.83■■■□□ 2.85
USP12O75317 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.72■■■□□ 2.83
USP12O75317 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.7■■■□□ 2.83
USP12O75317 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
USP12O75317 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.39■■■□□ 2.78
USP12O75317 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
USP12O75317 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
USP12O75317 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.86■■■□□ 2.69
USP12O75317 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
USP12O75317 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
USP12O75317 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.77■■■□□ 2.68
USP12O75317 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.65■■■□□ 2.66
USP12O75317 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
USP12O75317 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
USP12O75317 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
USP12O75317 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
USP12O75317 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
USP12O75317 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.41■■■□□ 2.62
USP12O75317 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.36■■■□□ 2.61
USP12O75317 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
USP12O75317 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
USP12O75317 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
USP12O75317 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
USP12O75317 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
USP12O75317 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
USP12O75317 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
USP12O75317 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
USP12O75317 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.14■■■□□ 2.58
USP12O75317 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
USP12O75317 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
USP12O75317 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
USP12O75317 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.91■■■□□ 2.54
USP12O75317 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
USP12O75317 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
USP12O75317 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
USP12O75317 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.73■■■□□ 2.51
USP12O75317 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
USP12O75317 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
USP12O75317 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.51■■■□□ 2.47
USP12O75317 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.5■■■□□ 2.47
USP12O75317 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
USP12O75317 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
USP12O75317 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
USP12O75317 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
USP12O75317 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
USP12O75317 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.44■■■□□ 2.46
USP12O75317 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
USP12O75317 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
USP12O75317 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
USP12O75317 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
USP12O75317 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.28■■■□□ 2.44
USP12O75317 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.23■■■□□ 2.43
USP12O75317 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
USP12O75317 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
USP12O75317 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.19■■■□□ 2.42
USP12O75317 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
USP12O75317 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
USP12O75317 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
USP12O75317 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
USP12O75317 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
USP12O75317 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.97■■■□□ 2.39
USP12O75317 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
USP12O75317 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
USP12O75317 AC006077.2-201ENST00000623591 457 ntBASIC29.92■■■□□ 2.38
USP12O75317 ZNRF2P1-201ENST00000441407 443 ntBASIC29.91■■■□□ 2.38
USP12O75317 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
USP12O75317 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
USP12O75317 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.89■■■□□ 2.38
USP12O75317 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
USP12O75317 AC015813.7-201ENST00000623294 581 ntBASIC29.85■■■□□ 2.37
USP12O75317 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.78■■■□□ 2.36
USP12O75317 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
USP12O75317 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
USP12O75317 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.73■■■□□ 2.35
USP12O75317 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
USP12O75317 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
USP12O75317 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.66■■■□□ 2.34
USP12O75317 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
USP12O75317 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
USP12O75317 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
USP12O75317 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
USP12O75317 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
USP12O75317 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
USP12O75317 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
USP12O75317 AC145285.7-201ENST00000614819 1539 ntBASIC29.45■■■□□ 2.3
USP12O75317 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
USP12O75317 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
USP12O75317 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
USP12O75317 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
USP12O75317 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
USP12O75317 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms