Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
TRBV7-1A0A0A6YYK4 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRBV7-1A0A0A6YYK4 AL356512.1-201ENST00000607453 1739 ntBASIC25.79■■□□□ 1.72
TRBV7-1A0A0A6YYK4 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
TRBV7-1A0A0A6YYK4 HES6-203ENST00000409160 1600 ntTSL 2 BASIC25.57■■□□□ 1.68
TRBV7-1A0A0A6YYK4 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRBV7-1A0A0A6YYK4 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TRBV7-1A0A0A6YYK4 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC25.31■■□□□ 1.64
TRBV7-1A0A0A6YYK4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC25.26■■□□□ 1.63
TRBV7-1A0A0A6YYK4 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC25.13■■□□□ 1.61
TRBV7-1A0A0A6YYK4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC25.08■■□□□ 1.61
TRBV7-1A0A0A6YYK4 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.61
TRBV7-1A0A0A6YYK4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRBV7-1A0A0A6YYK4 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
TRBV7-1A0A0A6YYK4 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRBV7-1A0A0A6YYK4 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
TRBV7-1A0A0A6YYK4 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
TRBV7-1A0A0A6YYK4 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRBV7-1A0A0A6YYK4 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC24.31■■□□□ 1.48
TRBV7-1A0A0A6YYK4 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC24.24■■□□□ 1.47
TRBV7-1A0A0A6YYK4 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
TRBV7-1A0A0A6YYK4 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
TRBV7-1A0A0A6YYK4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC24.19■■□□□ 1.46
TRBV7-1A0A0A6YYK4 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
TRBV7-1A0A0A6YYK4 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC24.14■■□□□ 1.45
TRBV7-1A0A0A6YYK4 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
TRBV7-1A0A0A6YYK4 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
TRBV7-1A0A0A6YYK4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC23.99■■□□□ 1.43
TRBV7-1A0A0A6YYK4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRBV7-1A0A0A6YYK4 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRBV7-1A0A0A6YYK4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRBV7-1A0A0A6YYK4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
TRBV7-1A0A0A6YYK4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRBV7-1A0A0A6YYK4 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC23.71■■□□□ 1.39
TRBV7-1A0A0A6YYK4 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRBV7-1A0A0A6YYK4 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC23.67■■□□□ 1.38
TRBV7-1A0A0A6YYK4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRBV7-1A0A0A6YYK4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRBV7-1A0A0A6YYK4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRBV7-1A0A0A6YYK4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC23.54■■□□□ 1.36
TRBV7-1A0A0A6YYK4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRBV7-1A0A0A6YYK4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRBV7-1A0A0A6YYK4 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV7-1A0A0A6YYK4 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRBV7-1A0A0A6YYK4 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TRBV7-1A0A0A6YYK4 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV7-1A0A0A6YYK4 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
TRBV7-1A0A0A6YYK4 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC23.27■■□□□ 1.32
TRBV7-1A0A0A6YYK4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TRBV7-1A0A0A6YYK4 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRBV7-1A0A0A6YYK4 ILK-212ENST00000532063 1617 ntTSL 2 BASIC23.26■■□□□ 1.31
TRBV7-1A0A0A6YYK4 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRBV7-1A0A0A6YYK4 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRBV7-1A0A0A6YYK4 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC23.24■■□□□ 1.31
TRBV7-1A0A0A6YYK4 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TRBV7-1A0A0A6YYK4 INO80B-203ENST00000409917 796 ntTSL 2 BASIC23.14■■□□□ 1.29
TRBV7-1A0A0A6YYK4 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRBV7-1A0A0A6YYK4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRBV7-1A0A0A6YYK4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRBV7-1A0A0A6YYK4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC23.05■■□□□ 1.28
TRBV7-1A0A0A6YYK4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRBV7-1A0A0A6YYK4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC23.02■■□□□ 1.28
TRBV7-1A0A0A6YYK4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
TRBV7-1A0A0A6YYK4 AC015813.7-201ENST00000623294 581 ntBASIC22.98■■□□□ 1.27
TRBV7-1A0A0A6YYK4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRBV7-1A0A0A6YYK4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC22.96■■□□□ 1.27
TRBV7-1A0A0A6YYK4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRBV7-1A0A0A6YYK4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRBV7-1A0A0A6YYK4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRBV7-1A0A0A6YYK4 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRBV7-1A0A0A6YYK4 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRBV7-1A0A0A6YYK4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRBV7-1A0A0A6YYK4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
TRBV7-1A0A0A6YYK4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC22.83■■□□□ 1.25
TRBV7-1A0A0A6YYK4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC22.79■■□□□ 1.24
TRBV7-1A0A0A6YYK4 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRBV7-1A0A0A6YYK4 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
TRBV7-1A0A0A6YYK4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRBV7-1A0A0A6YYK4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
TRBV7-1A0A0A6YYK4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRBV7-1A0A0A6YYK4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC22.65■■□□□ 1.22
TRBV7-1A0A0A6YYK4 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV7-1A0A0A6YYK4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRBV7-1A0A0A6YYK4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
TRBV7-1A0A0A6YYK4 AC145285.7-201ENST00000614819 1539 ntBASIC22.6■■□□□ 1.21
TRBV7-1A0A0A6YYK4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV7-1A0A0A6YYK4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV7-1A0A0A6YYK4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRBV7-1A0A0A6YYK4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRBV7-1A0A0A6YYK4 AC006077.2-201ENST00000623591 457 ntBASIC22.54■■□□□ 1.2
TRBV7-1A0A0A6YYK4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRBV7-1A0A0A6YYK4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRBV7-1A0A0A6YYK4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRBV7-1A0A0A6YYK4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC22.48■■□□□ 1.19
TRBV7-1A0A0A6YYK4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRBV7-1A0A0A6YYK4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRBV7-1A0A0A6YYK4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC22.43■■□□□ 1.18
TRBV7-1A0A0A6YYK4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
TRBV7-1A0A0A6YYK4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRBV7-1A0A0A6YYK4 ZNRF2P1-201ENST00000441407 443 ntBASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms