Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC097493.4-201ENST00000641197 219 ntBASIC20.02■□□□□ 0.8
CISHQ9NSE2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CISHQ9NSE2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CISHQ9NSE2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CISHQ9NSE2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CISHQ9NSE2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CISHQ9NSE2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.02■□□□□ 0.79
CISHQ9NSE2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CISHQ9NSE2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CISHQ9NSE2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.01■□□□□ 0.79
CISHQ9NSE2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.01■□□□□ 0.79
CISHQ9NSE2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.01■□□□□ 0.79
CISHQ9NSE2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.01■□□□□ 0.79
CISHQ9NSE2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CISHQ9NSE2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.01■□□□□ 0.79
CISHQ9NSE2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.01■□□□□ 0.79
CISHQ9NSE2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.01■□□□□ 0.79
CISHQ9NSE2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CISHQ9NSE2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.01■□□□□ 0.79
CISHQ9NSE2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
CISHQ9NSE2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CISHQ9NSE2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CISHQ9NSE2 ANO7L1-203ENST00000602586 1720 ntBASIC20.01■□□□□ 0.79
CISHQ9NSE2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20■□□□□ 0.79
CISHQ9NSE2 AC036111.1-201ENST00000533973 1582 ntBASIC20■□□□□ 0.79
CISHQ9NSE2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CISHQ9NSE2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20■□□□□ 0.79
CISHQ9NSE2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20■□□□□ 0.79
CISHQ9NSE2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20■□□□□ 0.79
CISHQ9NSE2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20■□□□□ 0.79
CISHQ9NSE2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CISHQ9NSE2 HMGA1P5-201ENST00000412453 271 ntBASIC20■□□□□ 0.79
CISHQ9NSE2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20■□□□□ 0.79
CISHQ9NSE2 MIR3180-5-201ENST00000583743 153 ntBASIC20■□□□□ 0.79
CISHQ9NSE2 CR769767.2-201ENST00000622735 460 ntBASIC20■□□□□ 0.79
CISHQ9NSE2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CISHQ9NSE2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20■□□□□ 0.79
CISHQ9NSE2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20■□□□□ 0.79
CISHQ9NSE2 KRT8P45-201ENST00000414328 1447 ntBASIC20■□□□□ 0.79
CISHQ9NSE2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CISHQ9NSE2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CISHQ9NSE2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CISHQ9NSE2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20■□□□□ 0.79
CISHQ9NSE2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20■□□□□ 0.79
CISHQ9NSE2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20■□□□□ 0.79
CISHQ9NSE2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CISHQ9NSE2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CISHQ9NSE2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CISHQ9NSE2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
CISHQ9NSE2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CISHQ9NSE2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CISHQ9NSE2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CISHQ9NSE2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CISHQ9NSE2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.99■□□□□ 0.79
CISHQ9NSE2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CISHQ9NSE2 MIR564-202ENST00000385049 94 ntBASIC19.99■□□□□ 0.79
CISHQ9NSE2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CISHQ9NSE2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.99■□□□□ 0.79
CISHQ9NSE2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.99■□□□□ 0.79
CISHQ9NSE2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.99■□□□□ 0.79
CISHQ9NSE2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CISHQ9NSE2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
CISHQ9NSE2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CISHQ9NSE2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CISHQ9NSE2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CISHQ9NSE2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CISHQ9NSE2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.99■□□□□ 0.79
CISHQ9NSE2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
CISHQ9NSE2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CISHQ9NSE2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.98■□□□□ 0.79
CISHQ9NSE2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
CISHQ9NSE2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.98■□□□□ 0.79
CISHQ9NSE2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CISHQ9NSE2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.98■□□□□ 0.79
CISHQ9NSE2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.98■□□□□ 0.79
CISHQ9NSE2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.98■□□□□ 0.79
CISHQ9NSE2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.98■□□□□ 0.79
CISHQ9NSE2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CISHQ9NSE2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CISHQ9NSE2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CISHQ9NSE2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.98■□□□□ 0.79
CISHQ9NSE2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CISHQ9NSE2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CISHQ9NSE2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CISHQ9NSE2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms