Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.42■□□□□ 0.38
ZNF559Q9BR84 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.42■□□□□ 0.38
ZNF559Q9BR84 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ZNF559Q9BR84 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF559Q9BR84 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF559Q9BR84 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
ZNF559Q9BR84 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF559Q9BR84 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF559Q9BR84 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 NAPSB-206ENST00000562112 1266 ntBASIC17.41■□□□□ 0.38
ZNF559Q9BR84 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 AL445675.2-201ENST00000620291 557 ntBASIC17.41■□□□□ 0.38
ZNF559Q9BR84 AC131212.4-201ENST00000623606 975 ntBASIC17.41■□□□□ 0.38
ZNF559Q9BR84 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF559Q9BR84 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 AL512353.2-201ENST00000448759 1962 ntBASIC17.4■□□□□ 0.38
ZNF559Q9BR84 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 AC113347.1-201ENST00000413321 391 ntBASIC17.4■□□□□ 0.38
ZNF559Q9BR84 AL137013.1-201ENST00000432946 1228 ntBASIC17.4■□□□□ 0.38
ZNF559Q9BR84 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 Z85996.1-201ENST00000494644 937 ntBASIC17.4■□□□□ 0.38
ZNF559Q9BR84 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 REXO1L10P-201ENST00000615707 1290 ntBASIC17.4■□□□□ 0.38
ZNF559Q9BR84 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 KRT18P22-201ENST00000402024 1347 ntBASIC17.4■□□□□ 0.38
ZNF559Q9BR84 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ZNF559Q9BR84 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.39■□□□□ 0.38
ZNF559Q9BR84 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.39■□□□□ 0.38
ZNF559Q9BR84 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 AC079598.2-202ENST00000546624 1451 ntBASIC17.39■□□□□ 0.37
ZNF559Q9BR84 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 KRT18P57-201ENST00000443599 1254 ntBASIC17.39■□□□□ 0.37
ZNF559Q9BR84 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF559Q9BR84 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms