Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 SKP1-201ENST00000328392 572 ntTSL 56.88□□□□□ -1.312e-12■■□□□ 11.8
SND1Q7KZF4 SKP1-205ENST00000519054 654 ntTSL 36.85□□□□□ -1.312e-12■■□□□ 11.8
SND1Q7KZF4 SKP1-212ENST00000523966 899 ntTSL 36.81□□□□□ -1.322e-12■■□□□ 11.8
SND1Q7KZF4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.422e-12■■□□□ 11.8
SND1Q7KZF4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.512e-12■■□□□ 11.8
SND1Q7KZF4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.48□□□□□ -1.532e-12■■□□□ 11.8
SND1Q7KZF4 PLP2-202ENST00000376327 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.543e-8■■□□□ 11.8
SND1Q7KZF4 GCLM-203ENST00000467772 625 ntTSL 34.93□□□□□ -1.624e-6■■□□□ 11.8
SND1Q7KZF4 CERS2-213ENST00000560793 1661 ntTSL 1 (best)10.89□□□□□ -0.671e-7■■□□□ 11.8
SND1Q7KZF4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.28■□□□□ 0.24e-8■■□□□ 11.8
SND1Q7KZF4 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.074e-8■■□□□ 11.8
SND1Q7KZF4 SND1-214ENST00000489417 1447 ntTSL 221.73■■□□□ 1.071e-7■■□□□ 11.8
SND1Q7KZF4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.29e-8■■□□□ 11.8
SND1Q7KZF4 ABCB6-210ENST00000492953 570 ntTSL 416.32■□□□□ 0.23e-7■■□□□ 11.8
SND1Q7KZF4 FKBP11-213ENST00000553027 4957 nt15.79■□□□□ 0.129e-8■■□□□ 11.8
SND1Q7KZF4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15□□□□□ -0.019e-8■■□□□ 11.8
SND1Q7KZF4 POFUT1-204ENST00000465791 768 ntTSL 314.33□□□□□ -0.126e-13■■□□□ 11.8
SND1Q7KZF4 FKBP11-201ENST00000256680 725 ntTSL 314.23□□□□□ -0.139e-8■■□□□ 11.8
SND1Q7KZF4 FAT1-202ENST00000500085 2224 ntTSL 214□□□□□ -0.172e-8■■□□□ 11.8
SND1Q7KZF4 FKBP11-210ENST00000551694 2661 ntTSL 213.74□□□□□ -0.219e-8■■□□□ 11.8
SND1Q7KZF4 SMPD1-202ENST00000526280 1344 ntTSL 1 (best)13.41□□□□□ -0.269e-8■■□□□ 11.8
SND1Q7KZF4 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.279e-8■■□□□ 11.8
SND1Q7KZF4 SND1-212ENST00000485871 597 ntTSL 311.71□□□□□ -0.531e-7■■□□□ 11.8
SND1Q7KZF4 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.869e-8■■□□□ 11.8
SND1Q7KZF4 FKBP11-205ENST00000546847 524 ntTSL 38.88□□□□□ -0.999e-8■■□□□ 11.8
SND1Q7KZF4 FKBP11-209ENST00000551094 517 ntTSL 28.68□□□□□ -1.029e-8■■□□□ 11.8
SND1Q7KZF4 FAT1-204ENST00000507105 854 ntTSL 37.68□□□□□ -1.182e-8■■□□□ 11.8
SND1Q7KZF4 PSMA4-221ENST00000560842 574 ntTSL 1 (best)8.15□□□□□ -1.13e-8■■□□□ 11.8
SND1Q7KZF4 ECE1-208ENST00000473505 674 ntTSL 316.09■□□□□ 0.171e-6■■□□□ 11.8
SND1Q7KZF4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.37e-7■■□□□ 11.8
SND1Q7KZF4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.327e-7■■□□□ 11.8
SND1Q7KZF4 EIF3I-201ENST00000355082 564 ntTSL 315.39■□□□□ 0.059e-9■■□□□ 11.8
SND1Q7KZF4 EIF3I-206ENST00000489353 527 ntTSL 311.1□□□□□ -0.639e-9■■□□□ 11.8
SND1Q7KZF4 LCP1-206ENST00000469227 730 ntTSL 314.57□□□□□ -0.081e-6■■□□□ 11.8
SND1Q7KZF4 LCP1-207ENST00000494531 537 ntTSL 39.62□□□□□ -0.871e-6■■□□□ 11.8
SND1Q7KZF4 FLNA-215ENST00000474358 696 ntTSL 218.1■□□□□ 0.491e-8■■□□□ 11.8
SND1Q7KZF4 FLNA-209ENST00000444578 843 ntTSL 317.34■□□□□ 0.371e-8■■□□□ 11.8
SND1Q7KZF4 EMP3-209ENST00000599704 753 ntTSL 315.64■□□□□ 0.093e-9■■□□□ 11.7
SND1Q7KZF4 P3H4-205ENST00000484247 1866 ntTSL 215.69■□□□□ 0.18e-10■■□□□ 11.7
SND1Q7KZF4 P3H4-203ENST00000465097 571 ntTSL 515.21■□□□□ 0.038e-10■■□□□ 11.7
SND1Q7KZF4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.183e-8■■□□□ 11.7
SND1Q7KZF4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.8■□□□□ 0.62e-7■■□□□ 11.7
SND1Q7KZF4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.76■□□□□ 0.112e-7■■□□□ 11.7
SND1Q7KZF4 RRM2-206ENST00000474701 1060 ntTSL 214.55□□□□□ -0.082e-7■■□□□ 11.7
SND1Q7KZF4 RRM2-212ENST00000615152 3434 ntTSL 1 (best) BASIC12.24□□□□□ -0.452e-7■■□□□ 11.7
SND1Q7KZF4 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.892e-7■■□□□ 11.7
SND1Q7KZF4 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC8.31□□□□□ -1.082e-7■■□□□ 11.7
SND1Q7KZF4 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.025e-7■■□□□ 11.7
SND1Q7KZF4 CLCN3-206ENST00000507875 2485 ntTSL 29.95□□□□□ -0.823e-6■■□□□ 11.7
SND1Q7KZF4 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC9.66□□□□□ -0.863e-6■■□□□ 11.7
SND1Q7KZF4 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.013e-6■■□□□ 11.7
SND1Q7KZF4 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.69□□□□□ -1.183e-6■■□□□ 11.7
SND1Q7KZF4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.96□□□□□ -1.33e-6■■□□□ 11.7
SND1Q7KZF4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.353e-6■■□□□ 11.7
SND1Q7KZF4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.313e-6■■□□□ 11.7
SND1Q7KZF4 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.123e-6■■□□□ 11.7
SND1Q7KZF4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.3■■□□□ 1.642e-8■■□□□ 11.7
SND1Q7KZF4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.5■□□□□ 0.872e-8■■□□□ 11.7
SND1Q7KZF4 SHISA5-204ENST00000417962 2306 ntTSL 220.1■□□□□ 0.812e-8■■□□□ 11.7
SND1Q7KZF4 SHISA5-214ENST00000486344 713 ntTSL 218.74■□□□□ 0.592e-8■■□□□ 11.7
SND1Q7KZF4 SHISA5-212ENST00000465449 1739 ntTSL 218.57■□□□□ 0.562e-8■■□□□ 11.7
SND1Q7KZF4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.72■□□□□ 0.432e-8■■□□□ 11.7
SND1Q7KZF4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.37■□□□□ 0.372e-8■■□□□ 11.7
SND1Q7KZF4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.91■□□□□ 0.32e-8■■□□□ 11.7
SND1Q7KZF4 SHISA5-216ENST00000494854 1908 ntTSL 1 (best)16.63■□□□□ 0.252e-8■■□□□ 11.7
SND1Q7KZF4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.61■□□□□ 0.252e-8■■□□□ 11.7
SND1Q7KZF4 SHISA5-218ENST00000497863 972 ntTSL 216.07■□□□□ 0.162e-8■■□□□ 11.7
SND1Q7KZF4 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.082e-8■■□□□ 11.7
SND1Q7KZF4 SHISA5-211ENST00000460758 1297 ntTSL 1 (best)13.15□□□□□ -0.32e-8■■□□□ 11.7
SND1Q7KZF4 SHISA5-213ENST00000466424 673 ntTSL 212.05□□□□□ -0.482e-8■■□□□ 11.7
SND1Q7KZF4 HIST1H4D-201ENST00000614247 312 ntAPPRIS P1 BASIC10.2□□□□□ -0.784e-12■■□□□ 11.7
SND1Q7KZF4 SCAMP4-207ENST00000472442 2973 ntTSL 214.66□□□□□ -0.061e-7■■□□□ 11.7
SND1Q7KZF4 SLC16A3-207ENST00000578810 678 ntTSL 216.57■□□□□ 0.244e-13■■□□□ 11.7
SND1Q7KZF4 GARS-207ENST00000484093 644 ntTSL 49.05□□□□□ -0.962e-7■■□□□ 11.7
SND1Q7KZF4 MAD2L1-202ENST00000333047 1277 ntTSL 1 (best)16.67■□□□□ 0.265e-6■■□□□ 11.7
SND1Q7KZF4 MAD2L1-203ENST00000504707 764 ntTSL 216.67■□□□□ 0.265e-6■■□□□ 11.7
SND1Q7KZF4 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.035e-6■■□□□ 11.7
SND1Q7KZF4 ADTRP-210ENST00000514824 1923 ntTSL 214.94□□□□□ -0.026e-13■■□□□ 11.7
SND1Q7KZF4 SF3B3-206ENST00000565990 967 ntTSL 213.09□□□□□ -0.316e-13■■□□□ 11.7
SND1Q7KZF4 ADTRP-209ENST00000513651 942 ntTSL 1 (best)9.23□□□□□ -0.936e-13■■□□□ 11.7
SND1Q7KZF4 ADTRP-205ENST00000503285 526 ntTSL 57.24□□□□□ -1.256e-13■■□□□ 11.7
SND1Q7KZF4 VCP-203ENST00000448530 950 ntTSL 520.34■□□□□ 0.854e-7■■□□□ 11.7
SND1Q7KZF4 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC13.01□□□□□ -0.332e-50■■□□□ 11.7
SND1Q7KZF4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.155e-10■■□□□ 11.7
SND1Q7KZF4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.085e-10■■□□□ 11.7
SND1Q7KZF4 GRINA-209ENST00000533377 627 ntTSL 215.88■□□□□ 0.135e-10■■□□□ 11.7
SND1Q7KZF4 GRINA-204ENST00000527194 806 ntTSL 215.34■□□□□ 0.055e-10■■□□□ 11.7
SND1Q7KZF4 GRINA-210ENST00000534791 1050 ntTSL 510.84□□□□□ -0.675e-10■■□□□ 11.7
SND1Q7KZF4 GRINA-208ENST00000533044 564 ntTSL 39.65□□□□□ -0.865e-10■■□□□ 11.7
SND1Q7KZF4 TMEM101-203ENST00000586174 593 ntTSL 411.39□□□□□ -0.594e-11■■□□□ 11.7
SND1Q7KZF4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.014e-9■■□□□ 11.7
SND1Q7KZF4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.934e-9■■□□□ 11.7
SND1Q7KZF4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.95■■□□□ 1.94e-9■■□□□ 11.7
SND1Q7KZF4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.774e-9■■□□□ 11.7
SND1Q7KZF4 VEGFA-220ENST00000519767 970 ntTSL 1 (best)26.09■■□□□ 1.774e-9■■□□□ 11.7
SND1Q7KZF4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.02■■□□□ 1.764e-9■■□□□ 11.7
SND1Q7KZF4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.02■■□□□ 1.764e-9■■□□□ 11.7
SND1Q7KZF4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.02■■□□□ 1.764e-9■■□□□ 11.7
SND1Q7KZF4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.764e-9■■□□□ 11.7
SND1Q7KZF4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.02■■□□□ 1.764e-9■■□□□ 11.7
Retrieved 100 of 13,567 protein–RNA pairs in 86.1 ms