RNA–Protein interactions for RNA: ENST00000494531.1

LCP1-207, Transcript of lymphocyte cytosolic protein 1, humanhuman

TSL 3

Gene LCP1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-207ENST00000494531 AEBP2Q6ZN18 517 aaPredicted RBP27.2■■□□□ 1.94
LCP1-207ENST00000494531 CHIC1Q5VXU3 224 aa26.68■■□□□ 1.86
LCP1-207ENST00000494531 PHF23Q9BUL5 403 aaPredicted RBP23.58■■□□□ 1.37
LCP1-207ENST00000494531 SENP3Q9H4L4 574 aaPredicted RBP22.88■■□□□ 1.25
LCP1-207ENST00000494531 PLPPR3Q6T4P5 718 aa21.69■■□□□ 1.06
LCP1-207ENST00000494531 FOXD1Q16676 465 aa21.3■■□□□ 1
LCP1-207ENST00000494531 PPP6R1Q9UPN7 881 aa20.73■□□□□ 0.91
LCP1-207ENST00000494531 ADRA2BP18089 450 aa20.67■□□□□ 0.9
LCP1-207ENST00000494531 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
LCP1-207ENST00000494531 PIAS4Q8N2W9 510 aaPredicted RBP20.06■□□□□ 0.8
LCP1-207ENST00000494531 MSH5O43196 834 aa19.43■□□□□ 0.7
LCP1-207ENST00000494531 PPP4R3CPQ6ZMV5 832 aa19.18■□□□□ 0.66
LCP1-207ENST00000494531 KCNA4P22459 653 aa19.04■□□□□ 0.64
LCP1-207ENST00000494531 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
LCP1-207ENST00000494531 MAPK8IP2Q13387 824 aaPredicted RBP18.71■□□□□ 0.59
LCP1-207ENST00000494531 NCBP3Q53F19 620 aaKnown RBP18.63■□□□□ 0.57
LCP1-207ENST00000494531 CNKSR2Q8WXI2 1034 aa18.56■□□□□ 0.56
LCP1-207ENST00000494531 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
LCP1-207ENST00000494531 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
LCP1-207ENST00000494531 CCDC180Q9P1Z9 1646 aa18.29■□□□□ 0.52
LCP1-207ENST00000494531 ABCC9O60706 1549 aa18.23■□□□□ 0.51
LCP1-207ENST00000494531 RNF216Q9NWF9 866 aaPredicted RBP18.16■□□□□ 0.5
LCP1-207ENST00000494531 SLC4A1APQ9BWU0 796 aaKnown RBP18.09■□□□□ 0.49
LCP1-207ENST00000494531 HOXD11P31277 338 aaPredicted RBP18.08■□□□□ 0.48
LCP1-207ENST00000494531 DNAJC5BQ9UF47 199 aa17.97■□□□□ 0.47
LCP1-207ENST00000494531 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
LCP1-207ENST00000494531 CSRNP3Q8WYN3 585 aa17.62■□□□□ 0.41
LCP1-207ENST00000494531 ZBTB22O15209 634 aa17.61■□□□□ 0.41
LCP1-207ENST00000494531 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
LCP1-207ENST00000494531 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
LCP1-207ENST00000494531 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
LCP1-207ENST00000494531 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
LCP1-207ENST00000494531 FOXD4L1Q9NU39 408 aa17.39■□□□□ 0.37
LCP1-207ENST00000494531 NACADO15069 1562 aa17.28■□□□□ 0.36
LCP1-207ENST00000494531 DCAF8L2P0C7V8 631 aa17.23■□□□□ 0.35
LCP1-207ENST00000494531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.11■□□□□ 0.33
LCP1-207ENST00000494531 MYO15BQ96JP2 1530 aa17.05■□□□□ 0.32
LCP1-207ENST00000494531 MYCNP04198 464 aaPredicted RBP17.02■□□□□ 0.32
LCP1-207ENST00000494531 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
LCP1-207ENST00000494531 PABPN1Q86U42 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
LCP1-207ENST00000494531 UNC13AQ9UPW8 1703 aa16.95■□□□□ 0.3
LCP1-207ENST00000494531 ZCCHC6Q5VYS8 1495 aaKnown RBP16.88■□□□□ 0.29
LCP1-207ENST00000494531 DCAF1Q9Y4B6 1507 aa16.84■□□□□ 0.29
LCP1-207ENST00000494531 BICRAQ9NZM4 1560 aa16.82■□□□□ 0.28
LCP1-207ENST00000494531 RNF39Q9H2S5 420 aa16.77■□□□□ 0.28
LCP1-207ENST00000494531 ATXN8OSP0DMR3 200 aa16.74■□□□□ 0.27
LCP1-207ENST00000494531 SHROOM4Q9ULL8 1493 aa16.68■□□□□ 0.26
LCP1-207ENST00000494531 ATF5Q9Y2D1 282 aaPredicted RBP16.68■□□□□ 0.26
LCP1-207ENST00000494531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
LCP1-207ENST00000494531 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
LCP1-207ENST00000494531 SAMD1Q6SPF0 538 aaPredicted RBP16.67■□□□□ 0.26
LCP1-207ENST00000494531 SCRIBQ14160 1630 aa16.66■□□□□ 0.26
LCP1-207ENST00000494531 C1QBPQ07021 282 aaKnown RBP16.51■□□□□ 0.23
LCP1-207ENST00000494531 CC2D2AQ9P2K1 1620 aa16.47■□□□□ 0.23
LCP1-207ENST00000494531 SPINK5Q9NQ38 1064 aaPredicted RBP16.45■□□□□ 0.22
LCP1-207ENST00000494531 EIF4G1Q04637 1599 aaKnown RBP16.45■□□□□ 0.22
LCP1-207ENST00000494531 CECR2Q9BXF3 1484 aa16.44■□□□□ 0.22
LCP1-207ENST00000494531 APLP2Q06481 763 aa16.39■□□□□ 0.21
LCP1-207ENST00000494531 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
LCP1-207ENST00000494531 CAPN15O75808 1086 aa16.25■□□□□ 0.19
LCP1-207ENST00000494531 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
LCP1-207ENST00000494531 CACNB1Q02641 598 aaPredicted RBP16.07■□□□□ 0.16
LCP1-207ENST00000494531 POLA2Q14181 598 aa16.06■□□□□ 0.16
LCP1-207ENST00000494531 DSG3P32926 999 aa16.03■□□□□ 0.16
LCP1-207ENST00000494531 ABCB7O75027 752 aa16.02■□□□□ 0.16
LCP1-207ENST00000494531 MKRN4PQ13434 485 aaPredicted RBP15.97■□□□□ 0.15
LCP1-207ENST00000494531 NCAPD3P42695 1498 aa15.93■□□□□ 0.14
LCP1-207ENST00000494531 SMARCA2P51531 1590 aa15.89■□□□□ 0.13
LCP1-207ENST00000494531 SMARCA4P51532 1647 aa15.89■□□□□ 0.13
LCP1-207ENST00000494531 ATAD2BQ9ULI0 1458 aa15.89■□□□□ 0.13
LCP1-207ENST00000494531 HMGXB3Q12766 1538 aa15.84■□□□□ 0.13
LCP1-207ENST00000494531 BAZ1AQ9NRL2 1556 aaPredicted RBP15.83■□□□□ 0.13
LCP1-207ENST00000494531 FKBP8Q14318 412 aa15.83■□□□□ 0.12
LCP1-207ENST00000494531 ERCC6Q03468 1493 aa15.8■□□□□ 0.12
LCP1-207ENST00000494531 BAZ1BQ9UIG0 1483 aaKnown RBP15.78■□□□□ 0.12
LCP1-207ENST00000494531 FBLN2P98095 1184 aa15.76■□□□□ 0.11
LCP1-207ENST00000494531 CUX2O14529 1486 aa15.73■□□□□ 0.11
LCP1-207ENST00000494531 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
LCP1-207ENST00000494531 PEG3Q9GZU2 1588 aa15.72■□□□□ 0.11
LCP1-207ENST00000494531 MROH2BQ7Z745 1585 aa15.67■□□□□ 0.1
LCP1-207ENST00000494531 DNAJC5Q9H3Z4 198 aa15.65■□□□□ 0.1
LCP1-207ENST00000494531 NESP48681 1621 aa15.65■□□□□ 0.1
LCP1-207ENST00000494531 LAMC3Q9Y6N6 1575 aa15.59■□□□□ 0.09
LCP1-207ENST00000494531 SPDYE4A6NLX3 237 aa15.59■□□□□ 0.09
LCP1-207ENST00000494531 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
LCP1-207ENST00000494531 PDS5BQ9NTI5 1447 aa15.52■□□□□ 0.08
LCP1-207ENST00000494531 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
LCP1-207ENST00000494531 WIZO95785 1651 aa15.49■□□□□ 0.07
LCP1-207ENST00000494531 PROM2Q8N271 834 aa15.49■□□□□ 0.07
LCP1-207ENST00000494531 KIF21AQ7Z4S6 1674 aa15.47■□□□□ 0.07
LCP1-207ENST00000494531 CADPSQ9ULU8 1353 aa15.46■□□□□ 0.07
LCP1-207ENST00000494531 SPDYE2BA6NHP3 402 aa15.39■□□□□ 0.05
LCP1-207ENST00000494531 SPDYE6P0CI01 402 aa15.39■□□□□ 0.05
LCP1-207ENST00000494531 SPDYE2Q495Y8 402 aa15.39■□□□□ 0.05
LCP1-207ENST00000494531 RSF1Q96T23 1441 aaPredicted RBP15.37■□□□□ 0.05
LCP1-207ENST00000494531 SSUH2Q9Y2M2 353 aa15.37■□□□□ 0.05
LCP1-207ENST00000494531 MRC2Q9UBG0 1479 aa15.37■□□□□ 0.05
LCP1-207ENST00000494531 ZNF692Q9BU19 519 aaPredicted RBP15.34■□□□□ 0.05
LCP1-207ENST00000494531 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.05
LCP1-207ENST00000494531 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms