RNA–Protein interactions for RNA: ENST00000486344.5

SHISA5-214, Transcript of shisa family member 5, humanhuman

TSL 2

Gene SHISA5, Length 713 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-214ENST00000486344 NISCHQ9Y2I1 1504 aa42.86■■■■■ 4.45
SHISA5-214ENST00000486344 CCDC180Q9P1Z9 1646 aa37.9■■■■□ 3.66
SHISA5-214ENST00000486344 ABCC9O60706 1549 aa36.7■■■■□ 3.47
SHISA5-214ENST00000486344 ZCCHC6Q5VYS8 1495 aaKnown RBP35.76■■■■□ 3.32
SHISA5-214ENST00000486344 DCAF8L2P0C7V8 631 aa35.72■■■■□ 3.31
SHISA5-214ENST00000486344 NACADO15069 1562 aa35.59■■■■□ 3.29
SHISA5-214ENST00000486344 MYO15BQ96JP2 1530 aa35.52■■■■□ 3.28
SHISA5-214ENST00000486344 RB1CC1Q8TDY2 1594 aa35.51■■■■□ 3.28
SHISA5-214ENST00000486344 DCAF1Q9Y4B6 1507 aa35.5■■■■□ 3.27
SHISA5-214ENST00000486344 UNC13AQ9UPW8 1703 aa34.63■■■■□ 3.13
SHISA5-214ENST00000486344 SCRIBQ14160 1630 aa34.57■■■■□ 3.12
SHISA5-214ENST00000486344 PABPN1Q86U42 306 aaKnown RBP eCLIP34.4■■■■□ 3.1
SHISA5-214ENST00000486344 BICRAQ9NZM4 1560 aa34.37■■■■□ 3.09
SHISA5-214ENST00000486344 SHROOM4Q9ULL8 1493 aa34.12■■■■□ 3.05
SHISA5-214ENST00000486344 EIF4G1Q04637 1599 aaKnown RBP33.45■■■□□ 2.95
SHISA5-214ENST00000486344 DNAJC5BQ9UF47 199 aa33.35■■■□□ 2.93
SHISA5-214ENST00000486344 CECR2Q9BXF3 1484 aa33.31■■■□□ 2.92
SHISA5-214ENST00000486344 CC2D2AQ9P2K1 1620 aa33.21■■■□□ 2.91
SHISA5-214ENST00000486344 BAZ1AQ9NRL2 1556 aaPredicted RBP33.19■■■□□ 2.9
SHISA5-214ENST00000486344 SMARCA4P51532 1647 aa33.14■■■□□ 2.9
SHISA5-214ENST00000486344 MROH2BQ7Z745 1585 aa33■■■□□ 2.87
SHISA5-214ENST00000486344 SMARCA2P51531 1590 aa32.89■■■□□ 2.86
SHISA5-214ENST00000486344 ATAD2BQ9ULI0 1458 aa32.89■■■□□ 2.86
SHISA5-214ENST00000486344 NCAPD3P42695 1498 aa32.85■■■□□ 2.85
SHISA5-214ENST00000486344 PEG3Q9GZU2 1588 aa32.83■■■□□ 2.85
SHISA5-214ENST00000486344 RSF1Q96T23 1441 aaPredicted RBP32.81■■■□□ 2.84
SHISA5-214ENST00000486344 HMGXB3Q12766 1538 aa32.68■■■□□ 2.82
SHISA5-214ENST00000486344 WIZO95785 1651 aa32.66■■■□□ 2.82
SHISA5-214ENST00000486344 BAZ1BQ9UIG0 1483 aaKnown RBP32.64■■■□□ 2.82
SHISA5-214ENST00000486344 TOP2AP11388 1531 aaKnown RBP32.36■■■□□ 2.77
SHISA5-214ENST00000486344 SUPT5HO00267 1087 aaKnown RBP32.32■■■□□ 2.76
SHISA5-214ENST00000486344 CCDC88BA6NC98 1476 aa32■■■□□ 2.71
SHISA5-214ENST00000486344 CADPSQ9ULU8 1353 aa31.92■■■□□ 2.7
SHISA5-214ENST00000486344 LAMC3Q9Y6N6 1575 aa31.89■■■□□ 2.7
SHISA5-214ENST00000486344 NESP48681 1621 aa31.86■■■□□ 2.69
SHISA5-214ENST00000486344 CFTRP13569 1480 aa31.79■■■□□ 2.68
SHISA5-214ENST00000486344 PDS5BQ9NTI5 1447 aa31.7■■■□□ 2.67
SHISA5-214ENST00000486344 ERCC6Q03468 1493 aa31.64■■■□□ 2.66
SHISA5-214ENST00000486344 PRDM2Q13029 1718 aa31.52■■■□□ 2.64
SHISA5-214ENST00000486344 FANCD2Q9BXW9 1451 aa31.52■■■□□ 2.64
SHISA5-214ENST00000486344 KIF21AQ7Z4S6 1674 aa31.48■■■□□ 2.63
SHISA5-214ENST00000486344 CEP164Q9UPV0 1460 aa31.44■■■□□ 2.62
SHISA5-214ENST00000486344 MRC2Q9UBG0 1479 aa31.3■■■□□ 2.6
SHISA5-214ENST00000486344 THOC2Q8NI27 1593 aaKnown RBP31.27■■■□□ 2.6
SHISA5-214ENST00000486344 WDR62O43379 1518 aa31.17■■■□□ 2.58
SHISA5-214ENST00000486344 CUX2O14529 1486 aa31.16■■■□□ 2.58
SHISA5-214ENST00000486344 URB2Q14146 1524 aaKnown RBP31.14■■■□□ 2.58
SHISA5-214ENST00000486344 ABCC8Q09428 1581 aa31.14■■■□□ 2.58
SHISA5-214ENST00000486344 TOPBP1Q92547 1522 aa31.05■■■□□ 2.56
SHISA5-214ENST00000486344 DNMBPQ6XZF7 1577 aa31.04■■■□□ 2.56
SHISA5-214ENST00000486344 CUX1P39880 1505 aa30.93■■■□□ 2.54
SHISA5-214ENST00000486344 WRNQ14191 1432 aaPredicted RBP eCLIP30.93■■■□□ 2.54
SHISA5-214ENST00000486344 POLA1P09884 1462 aaPredicted RBP30.81■■■□□ 2.52
SHISA5-214ENST00000486344 TOP2BQ02880 1626 aa30.8■■■□□ 2.52
SHISA5-214ENST00000486344 FGD5Q6ZNL6 1462 aa30.79■■■□□ 2.52
SHISA5-214ENST00000486344 IFT140Q96RY7 1462 aa30.78■■■□□ 2.52
SHISA5-214ENST00000486344 BIVM-ERCC5R4GMW8 1640 aa30.77■■■□□ 2.52
SHISA5-214ENST00000486344 SYNJ1O43426 1573 aa30.76■■■□□ 2.52
SHISA5-214ENST00000486344 SOGA1O94964 1423 aa30.74■■■□□ 2.51
SHISA5-214ENST00000486344 RAD54L2Q9Y4B4 1467 aa30.66■■■□□ 2.5
SHISA5-214ENST00000486344 TARBP1Q13395 1621 aaKnown RBP30.65■■■□□ 2.5
SHISA5-214ENST00000486344 ZNF608Q9ULD9 1512 aaPredicted RBP30.55■■■□□ 2.48
SHISA5-214ENST00000486344 TRIM41Q8WV44 630 aa30.54■■■□□ 2.48
SHISA5-214ENST00000486344 ABCA10Q8WWZ4 1543 aa30.53■■■□□ 2.48
SHISA5-214ENST00000486344 TDRD9Q8NDG6 1382 aaKnown RBP30.49■■■□□ 2.47
SHISA5-214ENST00000486344 WDR97A6NE52 1622 aa30.47■■■□□ 2.47
SHISA5-214ENST00000486344 AQRO60306 1485 aaKnown RBP eCLIP30.47■■■□□ 2.47
SHISA5-214ENST00000486344 EIF4G3O43432 1585 aaKnown RBP30.43■■■□□ 2.46
SHISA5-214ENST00000486344 CHIC1Q5VXU3 224 aa30.4■■■□□ 2.46
SHISA5-214ENST00000486344 GAPVD1Q14C86 1478 aa30.37■■■□□ 2.45
SHISA5-214ENST00000486344 ABCA5Q8WWZ7 1642 aa30.33■■■□□ 2.45
SHISA5-214ENST00000486344 GRIN2BQ13224 1484 aa30.31■■■□□ 2.44
SHISA5-214ENST00000486344 KIF27Q86VH2 1401 aa30.29■■■□□ 2.44
SHISA5-214ENST00000486344 PBRM1Q86U86 1689 aa30.2■■■□□ 2.43
SHISA5-214ENST00000486344 MAGI1Q96QZ7 1491 aaPredicted RBP30.19■■■□□ 2.42
SHISA5-214ENST00000486344 ERICH3Q5RHP9 1530 aa30.18■■■□□ 2.42
SHISA5-214ENST00000486344 SNAPC4Q5SXM2 1469 aa30.17■■■□□ 2.42
SHISA5-214ENST00000486344 IGF1RP08069 1367 aa30.11■■■□□ 2.41
SHISA5-214ENST00000486344 FBLN2P98095 1184 aa30.08■■■□□ 2.41
SHISA5-214ENST00000486344 CHMP7Q8WUX9 453 aaPredicted RBP30.08■■■□□ 2.41
SHISA5-214ENST00000486344 SYNJ2O15056 1496 aa30.06■■■□□ 2.4
SHISA5-214ENST00000486344 RUSC2Q8N2Y8 1516 aa30.06■■■□□ 2.4
SHISA5-214ENST00000486344 FHAD1B1AJZ9 1412 aa30.05■■■□□ 2.4
SHISA5-214ENST00000486344 OSCARQ8IYS5 282 aa30.03■■■□□ 2.4
SHISA5-214ENST00000486344 ADAMTS12P58397 1594 aa29.99■■■□□ 2.39
SHISA5-214ENST00000486344 EEA1Q15075 1411 aa29.98■■■□□ 2.39
SHISA5-214ENST00000486344 CHD1O14646 1710 aa29.96■■■□□ 2.39
SHISA5-214ENST00000486344 CUL7Q14999 1698 aa29.96■■■□□ 2.39
SHISA5-214ENST00000486344 CARMIL1Q5VZK9 1371 aa29.95■■■□□ 2.39
SHISA5-214ENST00000486344 CSRNP3Q8WYN3 585 aa29.91■■■□□ 2.38
SHISA5-214ENST00000486344 GRIN2AQ12879 1464 aa29.91■■■□□ 2.38
SHISA5-214ENST00000486344 FAM9AQ8IZU1 332 aaPredicted RBP29.84■■■□□ 2.37
SHISA5-214ENST00000486344 RAPGEF2Q9Y4G8 1499 aa29.8■■■□□ 2.36
SHISA5-214ENST00000486344 DNAJC5Q9H3Z4 198 aa29.79■■■□□ 2.36
SHISA5-214ENST00000486344 PRXQ9BXM0 1461 aa29.77■■■□□ 2.36
SHISA5-214ENST00000486344 NUP160Q12769 1436 aa29.76■■■□□ 2.35
SHISA5-214ENST00000486344 CEP170Q5SW79 1584 aa29.69■■■□□ 2.34
SHISA5-214ENST00000486344 CLASP1Q7Z460 1538 aa29.67■■■□□ 2.34
SHISA5-214ENST00000486344 KIAA0586Q9BVV6 1533 aa29.61■■■□□ 2.33
SHISA5-214ENST00000486344 KIF21BO75037 1637 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms