Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.4■□□□□ 0.38
TNFRSF11BO00300 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 PNMA6B-201ENST00000538162 1200 ntBASIC17.4■□□□□ 0.38
TNFRSF11BO00300 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.39■□□□□ 0.38
TNFRSF11BO00300 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.39■□□□□ 0.37
TNFRSF11BO00300 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 AC083906.2-201ENST00000511578 360 ntBASIC17.39■□□□□ 0.37
TNFRSF11BO00300 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 AL121832.2-201ENST00000610979 668 ntBASIC17.39■□□□□ 0.37
TNFRSF11BO00300 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF11BO00300 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 AL160286.2-201ENST00000567150 934 ntBASIC17.38■□□□□ 0.37
TNFRSF11BO00300 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 HEIH-201ENST00000623091 1652 ntBASIC17.38■□□□□ 0.37
TNFRSF11BO00300 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF11BO00300 FZD10-202ENST00000539839 3282 ntBASIC17.38■□□□□ 0.37
TNFRSF11BO00300 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF11BO00300 CROCCP5-201ENST00000436658 830 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms