Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.28■□□□□ 0.84
LRRC53A6NM62 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC53A6NM62 KRT8P32-201ENST00000512863 1461 ntBASIC20.28■□□□□ 0.84
LRRC53A6NM62 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRC53A6NM62 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.28■□□□□ 0.84
LRRC53A6NM62 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LRRC53A6NM62 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC53A6NM62 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC53A6NM62 LETM1P2-201ENST00000597330 2178 ntBASIC20.28■□□□□ 0.84
LRRC53A6NM62 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC53A6NM62 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
LRRC53A6NM62 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC53A6NM62 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC53A6NM62 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC53A6NM62 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LRRC53A6NM62 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC53A6NM62 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRC53A6NM62 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC53A6NM62 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC53A6NM62 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC53A6NM62 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LRRC53A6NM62 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC53A6NM62 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC53A6NM62 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC53A6NM62 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC53A6NM62 RPS2P4-201ENST00000476944 856 ntBASIC20.27■□□□□ 0.84
LRRC53A6NM62 PRSS44-201ENST00000515154 1146 ntBASIC20.27■□□□□ 0.84
LRRC53A6NM62 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC53A6NM62 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRC53A6NM62 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC53A6NM62 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC53A6NM62 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC53A6NM62 ABALON-201ENST00000629058 1903 ntBASIC20.27■□□□□ 0.84
LRRC53A6NM62 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC53A6NM62 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC53A6NM62 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.27■□□□□ 0.83
LRRC53A6NM62 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRC53A6NM62 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC53A6NM62 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC53A6NM62 AC091390.4-202ENST00000476426 537 ntBASIC20.26■□□□□ 0.83
LRRC53A6NM62 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.26■□□□□ 0.83
LRRC53A6NM62 AC006058.3-201ENST00000606217 1069 ntBASIC20.26■□□□□ 0.83
LRRC53A6NM62 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LRRC53A6NM62 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.26■□□□□ 0.83
LRRC53A6NM62 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 KRT8P3-201ENST00000519669 1449 ntBASIC20.26■□□□□ 0.83
LRRC53A6NM62 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 HTR7P1-201ENST00000538670 1336 ntBASIC20.26■□□□□ 0.83
LRRC53A6NM62 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC53A6NM62 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRC53A6NM62 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC53A6NM62 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC53A6NM62 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC53A6NM62 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC53A6NM62 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC53A6NM62 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC53A6NM62 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC53A6NM62 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC53A6NM62 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.25■□□□□ 0.83
LRRC53A6NM62 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC53A6NM62 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC53A6NM62 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.25■□□□□ 0.83
LRRC53A6NM62 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LRRC53A6NM62 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.25■□□□□ 0.83
LRRC53A6NM62 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC53A6NM62 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC53A6NM62 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC53A6NM62 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LRRC53A6NM62 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC53A6NM62 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC53A6NM62 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC53A6NM62 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC53A6NM62 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LRRC53A6NM62 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC53A6NM62 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
LRRC53A6NM62 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC53A6NM62 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC53A6NM62 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC53A6NM62 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms