Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 AC092368.3-202ENST00000574180 1591 ntBASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 HTR7P1-202ENST00000624664 4411 ntBASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 HEIH-201ENST00000623091 1652 ntBASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 TSPY23P-201ENST00000440136 739 ntBASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 AC091874.3-201ENST00000512672 1195 ntBASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 AC092118.2-201ENST00000613495 667 ntBASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 AC073111.5-205ENST00000641717 521 ntBASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBE2D4Q9Y2X8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 AC008764.6-201ENST00000595909 2069 ntBASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms