Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 AL138781.1-201ENST00000566567 1274 ntBASIC18.09■□□□□ 0.49
PDCD4Q53EL6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDCD4Q53EL6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.08■□□□□ 0.49
PDCD4Q53EL6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.08■□□□□ 0.49
PDCD4Q53EL6 KRT8P41-201ENST00000533985 1514 ntBASIC18.08■□□□□ 0.49
PDCD4Q53EL6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDCD4Q53EL6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDCD4Q53EL6 NBPF21P-201ENST00000425093 1451 ntBASIC18.08■□□□□ 0.49
PDCD4Q53EL6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
PDCD4Q53EL6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDCD4Q53EL6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDCD4Q53EL6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDCD4Q53EL6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDCD4Q53EL6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDCD4Q53EL6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.08■□□□□ 0.49
PDCD4Q53EL6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.08■□□□□ 0.49
PDCD4Q53EL6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDCD4Q53EL6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.08■□□□□ 0.49
PDCD4Q53EL6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 POM121L13P-201ENST00000422362 380 ntBASIC18.08■□□□□ 0.48
PDCD4Q53EL6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDCD4Q53EL6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 RCC2P6-201ENST00000526625 1557 ntBASIC18.07■□□□□ 0.48
PDCD4Q53EL6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDCD4Q53EL6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 AC106820.2-201ENST00000563775 3264 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms