Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.82■□□□□ 0.28
CCDC58Q4VC31 RPS2P52-201ENST00000469610 820 ntBASIC16.82■□□□□ 0.28
CCDC58Q4VC31 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.82■□□□□ 0.28
CCDC58Q4VC31 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC58Q4VC31 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 MKRN4P-201ENST00000444706 1521 ntBASIC16.81■□□□□ 0.28
CCDC58Q4VC31 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 AC084018.2-201ENST00000613093 2607 ntBASIC16.81■□□□□ 0.28
CCDC58Q4VC31 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC58Q4VC31 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 KRT18P16-201ENST00000510337 1294 ntBASIC16.8■□□□□ 0.28
CCDC58Q4VC31 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC58Q4VC31 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms