Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
GRIA1P42261 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.09■□□□□ 0.65
GRIA1P42261 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIA1P42261 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIA1P42261 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.09■□□□□ 0.65
GRIA1P42261 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.09■□□□□ 0.65
GRIA1P42261 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
GRIA1P42261 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
GRIA1P42261 FAM197Y1-201ENST00000421178 764 ntBASIC19.09■□□□□ 0.65
GRIA1P42261 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.09■□□□□ 0.65
GRIA1P42261 B3GAT3P1-201ENST00000471720 806 ntBASIC19.09■□□□□ 0.65
GRIA1P42261 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
GRIA1P42261 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.09■□□□□ 0.65
GRIA1P42261 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.09■□□□□ 0.65
GRIA1P42261 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.09■□□□□ 0.65
GRIA1P42261 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.09■□□□□ 0.65
GRIA1P42261 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.09■□□□□ 0.65
GRIA1P42261 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.09■□□□□ 0.65
GRIA1P42261 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
GRIA1P42261 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GRIA1P42261 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
GRIA1P42261 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIA1P42261 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
GRIA1P42261 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIA1P42261 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIA1P42261 KRT8P32-201ENST00000512863 1461 ntBASIC19.09■□□□□ 0.65
GRIA1P42261 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
GRIA1P42261 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
GRIA1P42261 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GRIA1P42261 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
GRIA1P42261 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GRIA1P42261 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
GRIA1P42261 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
GRIA1P42261 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GRIA1P42261 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GRIA1P42261 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GRIA1P42261 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GRIA1P42261 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
GRIA1P42261 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GRIA1P42261 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GRIA1P42261 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.08■□□□□ 0.64
GRIA1P42261 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.08■□□□□ 0.64
GRIA1P42261 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.08■□□□□ 0.64
GRIA1P42261 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.08■□□□□ 0.64
GRIA1P42261 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
GRIA1P42261 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.08■□□□□ 0.64
GRIA1P42261 AC142381.4-202ENST00000563973 229 ntBASIC19.08■□□□□ 0.64
GRIA1P42261 MIR6786-201ENST00000616843 113 ntBASIC19.08■□□□□ 0.64
GRIA1P42261 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
GRIA1P42261 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GRIA1P42261 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GRIA1P42261 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
GRIA1P42261 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GRIA1P42261 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GRIA1P42261 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
GRIA1P42261 KRT8P3-201ENST00000519669 1449 ntBASIC19.08■□□□□ 0.64
GRIA1P42261 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.08■□□□□ 0.64
GRIA1P42261 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
GRIA1P42261 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GRIA1P42261 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
GRIA1P42261 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.07■□□□□ 0.64
GRIA1P42261 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
GRIA1P42261 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GRIA1P42261 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GRIA1P42261 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GRIA1P42261 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GRIA1P42261 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
GRIA1P42261 BICD1-207ENST00000551848 1962 ntBASIC19.07■□□□□ 0.64
GRIA1P42261 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GRIA1P42261 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
GRIA1P42261 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
GRIA1P42261 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
GRIA1P42261 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GRIA1P42261 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.07■□□□□ 0.64
GRIA1P42261 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.07■□□□□ 0.64
GRIA1P42261 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.07■□□□□ 0.64
GRIA1P42261 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
GRIA1P42261 CKBP1-201ENST00000565489 1086 ntBASIC19.07■□□□□ 0.64
GRIA1P42261 AC026271.3-201ENST00000571884 352 ntBASIC19.07■□□□□ 0.64
GRIA1P42261 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.07■□□□□ 0.64
GRIA1P42261 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.07■□□□□ 0.64
GRIA1P42261 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.07■□□□□ 0.64
GRIA1P42261 AC018470.1-201ENST00000624790 3129 ntBASIC19.07■□□□□ 0.64
GRIA1P42261 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
GRIA1P42261 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GRIA1P42261 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
GRIA1P42261 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GRIA1P42261 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GRIA1P42261 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
GRIA1P42261 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIA1P42261 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIA1P42261 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
GRIA1P42261 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIA1P42261 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIA1P42261 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIA1P42261 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.06■□□□□ 0.64
GRIA1P42261 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
GRIA1P42261 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIA1P42261 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GRIA1P42261 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms