Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.29■□□□□ 0.2
DHFRP00374 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
DHFRP00374 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.29■□□□□ 0.2
DHFRP00374 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
DHFRP00374 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.29■□□□□ 0.2
DHFRP00374 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.29■□□□□ 0.2
DHFRP00374 AL031963.3-201ENST00000606441 850 ntBASIC16.29■□□□□ 0.2
DHFRP00374 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 PTBP1P-201ENST00000554374 1601 ntBASIC16.29■□□□□ 0.2
DHFRP00374 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
DHFRP00374 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DHFRP00374 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DHFRP00374 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 KRT8P20-201ENST00000423953 1409 ntBASIC16.28■□□□□ 0.2
DHFRP00374 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.28■□□□□ 0.2
DHFRP00374 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.28■□□□□ 0.2
DHFRP00374 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.28■□□□□ 0.2
DHFRP00374 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.28■□□□□ 0.2
DHFRP00374 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
DHFRP00374 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.28■□□□□ 0.2
DHFRP00374 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.28■□□□□ 0.2
DHFRP00374 AC034268.1-201ENST00000441047 882 ntBASIC16.28■□□□□ 0.2
DHFRP00374 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.28■□□□□ 0.2
DHFRP00374 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
DHFRP00374 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
DHFRP00374 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DHFRP00374 PKD1P5-201ENST00000532415 10291 ntBASIC16.28■□□□□ 0.2
DHFRP00374 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.28■□□□□ 0.2
DHFRP00374 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DHFRP00374 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.27■□□□□ 0.2
DHFRP00374 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
DHFRP00374 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
DHFRP00374 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
DHFRP00374 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
DHFRP00374 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
DHFRP00374 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
DHFRP00374 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.27■□□□□ 0.2
DHFRP00374 SLC7A5P1-201ENST00000568957 537 ntBASIC16.27■□□□□ 0.2
DHFRP00374 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.27■□□□□ 0.2
DHFRP00374 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.27■□□□□ 0.2
DHFRP00374 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DHFRP00374 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms