Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 KRT17P3-201ENST00000420566 1262 ntBASIC11.23□□□□□ -0.61
LIMD2Q9BT23 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 PNN-205ENST00000556530 601 ntTSL 2 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 AC083880.1-201ENST00000608266 535 ntBASIC11.23□□□□□ -0.61
LIMD2Q9BT23 AC120498.8-201ENST00000614275 531 ntBASIC11.23□□□□□ -0.61
LIMD2Q9BT23 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 POLI-202ENST00000406285 2030 ntTSL 2 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 KRT8P8-201ENST00000434750 1448 ntBASIC11.22□□□□□ -0.61
LIMD2Q9BT23 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 GOLGA6L3-201ENST00000507199 1679 ntBASIC11.22□□□□□ -0.61
LIMD2Q9BT23 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LIMD2Q9BT23 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC11.21□□□□□ -0.61
LIMD2Q9BT23 AL139384.1-201ENST00000612143 3047 ntBASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms