Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SIX6O95475 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SIX6O95475 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX6O95475 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX6O95475 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SIX6O95475 AC018553.1-201ENST00000616682 1458 ntBASIC15.8■□□□□ 0.12
SIX6O95475 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIX6O95475 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIX6O95475 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.8■□□□□ 0.12
SIX6O95475 IRS3P-201ENST00000223076 1006 ntBASIC15.8■□□□□ 0.12
SIX6O95475 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX6O95475 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX6O95475 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX6O95475 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.8■□□□□ 0.12
SIX6O95475 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.8■□□□□ 0.12
SIX6O95475 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX6O95475 AC027682.1-201ENST00000562846 899 ntBASIC15.8■□□□□ 0.12
SIX6O95475 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.8■□□□□ 0.12
SIX6O95475 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIX6O95475 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX6O95475 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX6O95475 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SIX6O95475 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX6O95475 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX6O95475 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIX6O95475 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIX6O95475 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.79■□□□□ 0.12
SIX6O95475 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SIX6O95475 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.79■□□□□ 0.12
SIX6O95475 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SIX6O95475 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.79■□□□□ 0.12
SIX6O95475 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SIX6O95475 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SIX6O95475 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.79■□□□□ 0.12
SIX6O95475 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.79■□□□□ 0.12
SIX6O95475 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 KRT18P20-201ENST00000548986 1279 ntBASIC15.79■□□□□ 0.12
SIX6O95475 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.79■□□□□ 0.12
SIX6O95475 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.79■□□□□ 0.12
SIX6O95475 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.79■□□□□ 0.12
SIX6O95475 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.79■□□□□ 0.12
SIX6O95475 AC083906.6-201ENST00000641366 219 ntBASIC15.79■□□□□ 0.12
SIX6O95475 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
SIX6O95475 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.79■□□□□ 0.12
SIX6O95475 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.79■□□□□ 0.12
SIX6O95475 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.79■□□□□ 0.12
SIX6O95475 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.79■□□□□ 0.12
SIX6O95475 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.79■□□□□ 0.12
SIX6O95475 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
SIX6O95475 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIX6O95475 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX6O95475 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX6O95475 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIX6O95475 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX6O95475 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIX6O95475 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX6O95475 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX6O95475 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX6O95475 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.78■□□□□ 0.12
SIX6O95475 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.78■□□□□ 0.12
SIX6O95475 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIX6O95475 AC135279.3-201ENST00000610945 1311 ntBASIC15.78■□□□□ 0.12
SIX6O95475 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX6O95475 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SIX6O95475 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.78■□□□□ 0.12
SIX6O95475 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIX6O95475 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIX6O95475 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.78■□□□□ 0.12
SIX6O95475 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX6O95475 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIX6O95475 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.78■□□□□ 0.12
SIX6O95475 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIX6O95475 AC018695.7-201ENST00000624587 2492 ntBASIC15.78■□□□□ 0.12
SIX6O95475 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.78■□□□□ 0.12
SIX6O95475 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.78■□□□□ 0.12
SIX6O95475 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms