Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 PRORSD1P-201ENST00000295112 541 ntBASIC17.07■□□□□ 0.32
HINT3Q9NQE9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.07■□□□□ 0.32
HINT3Q9NQE9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HINT3Q9NQE9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HINT3Q9NQE9 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.05■□□□□ 0.32
HINT3Q9NQE9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 TSPY21P-201ENST00000433481 731 ntBASIC17.05■□□□□ 0.32
HINT3Q9NQE9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HINT3Q9NQE9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms