Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCK1P16333 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NCK1P16333 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NCK1P16333 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.86■□□□□ 0.45
NCK1P16333 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.86■□□□□ 0.45
NCK1P16333 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.86■□□□□ 0.45
NCK1P16333 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.86■□□□□ 0.45
NCK1P16333 AC105036.2-201ENST00000569468 176 ntBASIC17.86■□□□□ 0.45
NCK1P16333 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.86■□□□□ 0.45
NCK1P16333 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NCK1P16333 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.86■□□□□ 0.45
NCK1P16333 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.86■□□□□ 0.45
NCK1P16333 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
NCK1P16333 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NCK1P16333 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
NCK1P16333 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NCK1P16333 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCK1P16333 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCK1P16333 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
NCK1P16333 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.86■□□□□ 0.45
NCK1P16333 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NCK1P16333 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCK1P16333 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NCK1P16333 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
NCK1P16333 AC073592.3-201ENST00000625118 1834 ntBASIC17.86■□□□□ 0.45
NCK1P16333 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCK1P16333 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCK1P16333 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.86■□□□□ 0.45
NCK1P16333 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.86■□□□□ 0.45
NCK1P16333 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCK1P16333 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.85■□□□□ 0.45
NCK1P16333 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NCK1P16333 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCK1P16333 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCK1P16333 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCK1P16333 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCK1P16333 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCK1P16333 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCK1P16333 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCK1P16333 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCK1P16333 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
NCK1P16333 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NCK1P16333 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCK1P16333 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
NCK1P16333 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NCK1P16333 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NCK1P16333 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.85■□□□□ 0.45
NCK1P16333 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.85■□□□□ 0.45
NCK1P16333 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.85■□□□□ 0.45
NCK1P16333 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NCK1P16333 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.85■□□□□ 0.45
NCK1P16333 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.85■□□□□ 0.45
NCK1P16333 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.85■□□□□ 0.45
NCK1P16333 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.85■□□□□ 0.45
NCK1P16333 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.85■□□□□ 0.45
NCK1P16333 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.85■□□□□ 0.45
NCK1P16333 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
NCK1P16333 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NCK1P16333 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NCK1P16333 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCK1P16333 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NCK1P16333 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.84■□□□□ 0.45
NCK1P16333 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NCK1P16333 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.84■□□□□ 0.45
NCK1P16333 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NCK1P16333 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.84■□□□□ 0.45
NCK1P16333 KRT18P16-201ENST00000510337 1294 ntBASIC17.84■□□□□ 0.45
NCK1P16333 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.84■□□□□ 0.45
NCK1P16333 AL121906.2-201ENST00000621597 723 ntBASIC17.84■□□□□ 0.45
NCK1P16333 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.84■□□□□ 0.45
NCK1P16333 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCK1P16333 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NCK1P16333 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.83■□□□□ 0.45
NCK1P16333 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.83■□□□□ 0.45
NCK1P16333 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NCK1P16333 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.83■□□□□ 0.45
NCK1P16333 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
NCK1P16333 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.83■□□□□ 0.45
NCK1P16333 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NCK1P16333 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NCK1P16333 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NCK1P16333 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NCK1P16333 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms