Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 AC018553.1-201ENST00000616682 1458 ntBASIC14.06□□□□□ -0.16
SMIM17P0DL12 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 MIR638-201ENST00000385237 100 ntBASIC14.06□□□□□ -0.16
SMIM17P0DL12 C2orf69P4-201ENST00000565394 541 ntBASIC14.06□□□□□ -0.16
SMIM17P0DL12 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 AL161938.1-201ENST00000569833 2180 ntBASIC14.06□□□□□ -0.16
SMIM17P0DL12 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM17P0DL12 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.06□□□□□ -0.16
SMIM17P0DL12 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.05□□□□□ -0.16
SMIM17P0DL12 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
SMIM17P0DL12 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.05□□□□□ -0.16
SMIM17P0DL12 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.05□□□□□ -0.16
SMIM17P0DL12 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SMIM17P0DL12 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
SMIM17P0DL12 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.05□□□□□ -0.16
SMIM17P0DL12 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.05□□□□□ -0.16
SMIM17P0DL12 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.05□□□□□ -0.16
SMIM17P0DL12 AC141586.3-201ENST00000562166 1838 ntBASIC14.05□□□□□ -0.16
SMIM17P0DL12 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SMIM17P0DL12 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.05□□□□□ -0.16
SMIM17P0DL12 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SMIM17P0DL12 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.05□□□□□ -0.16
SMIM17P0DL12 TNRC18P3-201ENST00000441896 2691 ntBASIC14.05□□□□□ -0.16
SMIM17P0DL12 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM17P0DL12 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM17P0DL12 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM17P0DL12 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM17P0DL12 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM17P0DL12 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SMIM17P0DL12 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.04□□□□□ -0.16
SMIM17P0DL12 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
SMIM17P0DL12 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.04□□□□□ -0.16
SMIM17P0DL12 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM17P0DL12 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
SMIM17P0DL12 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM17P0DL12 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM17P0DL12 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM17P0DL12 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SMIM17P0DL12 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM17P0DL12 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.04□□□□□ -0.16
SMIM17P0DL12 AC034268.1-201ENST00000441047 882 ntBASIC14.04□□□□□ -0.16
SMIM17P0DL12 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.04□□□□□ -0.16
SMIM17P0DL12 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM17P0DL12 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM17P0DL12 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms