Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLTAP09496 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CLTAP09496 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.65■□□□□ 0.9
CLTAP09496 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.65■□□□□ 0.9
CLTAP09496 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLTAP09496 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CLTAP09496 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLTAP09496 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CLTAP09496 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLTAP09496 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLTAP09496 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLTAP09496 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLTAP09496 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CLTAP09496 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CLTAP09496 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CLTAP09496 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLTAP09496 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLTAP09496 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLTAP09496 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CLTAP09496 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.64■□□□□ 0.9
CLTAP09496 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLTAP09496 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLTAP09496 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLTAP09496 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLTAP09496 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLTAP09496 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLTAP09496 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLTAP09496 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.64■□□□□ 0.89
CLTAP09496 AC113347.1-201ENST00000413321 391 ntBASIC20.64■□□□□ 0.89
CLTAP09496 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.64■□□□□ 0.89
CLTAP09496 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.64■□□□□ 0.89
CLTAP09496 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.64■□□□□ 0.89
CLTAP09496 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.64■□□□□ 0.89
CLTAP09496 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
CLTAP09496 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLTAP09496 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.64■□□□□ 0.89
CLTAP09496 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLTAP09496 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.64■□□□□ 0.89
CLTAP09496 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLTAP09496 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.64■□□□□ 0.89
CLTAP09496 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLTAP09496 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLTAP09496 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.64■□□□□ 0.89
CLTAP09496 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLTAP09496 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.63■□□□□ 0.89
CLTAP09496 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CLTAP09496 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.63■□□□□ 0.89
CLTAP09496 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.63■□□□□ 0.89
CLTAP09496 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.63■□□□□ 0.89
CLTAP09496 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.63■□□□□ 0.89
CLTAP09496 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CLTAP09496 HMGA1P5-201ENST00000412453 271 ntBASIC20.63■□□□□ 0.89
CLTAP09496 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CLTAP09496 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.63■□□□□ 0.89
CLTAP09496 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.63■□□□□ 0.89
CLTAP09496 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLTAP09496 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CLTAP09496 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLTAP09496 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.63■□□□□ 0.89
CLTAP09496 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.63■□□□□ 0.89
CLTAP09496 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLTAP09496 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.62■□□□□ 0.89
CLTAP09496 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.62■□□□□ 0.89
CLTAP09496 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLTAP09496 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLTAP09496 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.62■□□□□ 0.89
CLTAP09496 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CLTAP09496 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLTAP09496 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLTAP09496 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLTAP09496 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLTAP09496 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.62■□□□□ 0.89
CLTAP09496 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CLTAP09496 FAM210CP-201ENST00000445714 574 ntBASIC20.62■□□□□ 0.89
CLTAP09496 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.62■□□□□ 0.89
CLTAP09496 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.62■□□□□ 0.89
CLTAP09496 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.62■□□□□ 0.89
CLTAP09496 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLTAP09496 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLTAP09496 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.62■□□□□ 0.89
CLTAP09496 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.62■□□□□ 0.89
CLTAP09496 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.62■□□□□ 0.89
CLTAP09496 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms