Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF1O95521 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEF1O95521 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF1O95521 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF1O95521 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF1O95521 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF1O95521 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF1O95521 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEF1O95521 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEF1O95521 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF1O95521 MMP23A-201ENST00000234610 1017 ntBASIC18.8■□□□□ 0.6
PRAMEF1O95521 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEF1O95521 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF1O95521 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF1O95521 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEF1O95521 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF1O95521 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF1O95521 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.8■□□□□ 0.6
PRAMEF1O95521 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF1O95521 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF1O95521 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF1O95521 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF1O95521 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF1O95521 TNXA-203ENST00000507684 2038 ntBASIC18.79■□□□□ 0.6
PRAMEF1O95521 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF1O95521 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF1O95521 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF1O95521 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF1O95521 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PRAMEF1O95521 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF1O95521 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF1O95521 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF1O95521 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF1O95521 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PRAMEF1O95521 C2orf69P3-201ENST00000565542 1120 ntBASIC18.79■□□□□ 0.6
PRAMEF1O95521 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.79■□□□□ 0.6
PRAMEF1O95521 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF1O95521 KRT8P9-201ENST00000558927 1449 ntBASIC18.79■□□□□ 0.6
PRAMEF1O95521 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF1O95521 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF1O95521 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF1O95521 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF1O95521 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
PRAMEF1O95521 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF1O95521 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF1O95521 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF1O95521 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PRAMEF1O95521 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PRAMEF1O95521 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF1O95521 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF1O95521 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF1O95521 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.78■□□□□ 0.6
PRAMEF1O95521 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PRAMEF1O95521 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PRAMEF1O95521 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF1O95521 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF1O95521 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PRAMEF1O95521 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF1O95521 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF1O95521 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF1O95521 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.78■□□□□ 0.6
PRAMEF1O95521 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF1O95521 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.78■□□□□ 0.6
PRAMEF1O95521 SLC25A1P2-201ENST00000430693 912 ntBASIC18.78■□□□□ 0.6
PRAMEF1O95521 AC083906.6-201ENST00000641366 219 ntBASIC18.78■□□□□ 0.6
PRAMEF1O95521 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
PRAMEF1O95521 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF1O95521 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF1O95521 AL512353.2-201ENST00000448759 1962 ntBASIC18.77■□□□□ 0.6
PRAMEF1O95521 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PRAMEF1O95521 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.77■□□□□ 0.6
PRAMEF1O95521 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PRAMEF1O95521 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF1O95521 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.77■□□□□ 0.6
PRAMEF1O95521 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF1O95521 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF1O95521 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.77■□□□□ 0.6
PRAMEF1O95521 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.77■□□□□ 0.6
PRAMEF1O95521 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.77■□□□□ 0.6
PRAMEF1O95521 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.77■□□□□ 0.6
PRAMEF1O95521 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.77■□□□□ 0.6
PRAMEF1O95521 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.77■□□□□ 0.6
PRAMEF1O95521 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.77■□□□□ 0.6
PRAMEF1O95521 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF1O95521 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF1O95521 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
PRAMEF1O95521 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PRAMEF1O95521 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF1O95521 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF1O95521 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRAMEF1O95521 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRAMEF1O95521 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PRAMEF1O95521 CYP2D8P-201ENST00000433633 1490 ntBASIC18.77■□□□□ 0.59
PRAMEF1O95521 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.77■□□□□ 0.59
PRAMEF1O95521 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRAMEF1O95521 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.76■□□□□ 0.59
PRAMEF1O95521 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF1O95521 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PRAMEF1O95521 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF1O95521 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms