Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SH3PXD2BA1X283 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SH3PXD2BA1X283 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 AC090340.1-201ENST00000620778 4980 ntBASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 AC124283.5-201ENST00000624661 1809 ntBASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 WIZP1-201ENST00000531444 2299 ntBASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 FP475955.4-201ENST00000623131 1990 ntBASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 AC093525.10-201ENST00000625130 1569 ntBASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3PXD2BA1X283 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 HCG11-201ENST00000411553 5696 ntBASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 AC069152.1-201ENST00000438030 544 ntBASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3PXD2BA1X283 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.64■□□□□ 0.42
SH3PXD2BA1X283 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SH3PXD2BA1X283 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 SIRPAP1-201ENST00000448467 1770 ntBASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 RPS2P52-201ENST00000469610 820 ntBASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH3PXD2BA1X283 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms