Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 SDHAP1-207ENST00000440850 2000 ntBASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
FNDC3AQ9Y2H6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 AC004980.1-204ENST00000429707 299 ntBASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 FAM87A-204ENST00000613235 858 ntBASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 AL032819.2-201ENST00000624543 2162 ntBASIC19.32■□□□□ 0.68
FNDC3AQ9Y2H6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 INGX-201ENST00000359239 846 ntBASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNDC3AQ9Y2H6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 AC104417.2-201ENST00000562989 1793 ntBASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNDC3AQ9Y2H6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms