RNA–Protein interactions for RNA: ENST00000371628.7

LONRF3-202, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LONRF3, Length 2,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-202ENST00000371628 NISCHQ9Y2I1 1504 aa39.61■■■■□ 3.93
LONRF3-202ENST00000371628 SHROOM4Q9ULL8 1493 aa34.02■■■■□ 3.04
LONRF3-202ENST00000371628 ZCCHC6Q5VYS8 1495 aaKnown RBP33.61■■■□□ 2.97
LONRF3-202ENST00000371628 SUPT5HO00267 1087 aaKnown RBP33.59■■■□□ 2.97
LONRF3-202ENST00000371628 CCDC180Q9P1Z9 1646 aa33.49■■■□□ 2.95
LONRF3-202ENST00000371628 CHIC1Q5VXU3 224 aa32.92■■■□□ 2.86
LONRF3-202ENST00000371628 MYO15BQ96JP2 1530 aa32.91■■■□□ 2.86
LONRF3-202ENST00000371628 HRCP23327 699 aa32.73■■■□□ 2.83
LONRF3-202ENST00000371628 DCAF8L2P0C7V8 631 aa32.61■■■□□ 2.81
LONRF3-202ENST00000371628 DCAF1Q9Y4B6 1507 aa32.54■■■□□ 2.8
LONRF3-202ENST00000371628 PCGF6Q9BYE7 350 aa32.35■■■□□ 2.77
LONRF3-202ENST00000371628 LOC105371045A0A1W2PR82 267 aa31.92■■■□□ 2.7
LONRF3-202ENST00000371628 PPARGC1BQ86YN6 1023 aaKnown RBP31.88■■■□□ 2.69
LONRF3-202ENST00000371628 ABCC9O60706 1549 aa31.81■■■□□ 2.68
LONRF3-202ENST00000371628 TRIM26Q12899 539 aaPredicted RBP31.68■■■□□ 2.66
LONRF3-202ENST00000371628 RSF1Q96T23 1441 aaPredicted RBP31.51■■■□□ 2.64
LONRF3-202ENST00000371628 SCRIBQ14160 1630 aa31.42■■■□□ 2.62
LONRF3-202ENST00000371628 TRIM41Q8WV44 630 aa31.29■■■□□ 2.6
LONRF3-202ENST00000371628 RB1CC1Q8TDY2 1594 aa31.27■■■□□ 2.6
LONRF3-202ENST00000371628 ZEB1P37275 1124 aaPredicted RBP31.24■■■□□ 2.59
LONRF3-202ENST00000371628 FAM9AQ8IZU1 332 aaPredicted RBP31■■■□□ 2.55
LONRF3-202ENST00000371628 NACADO15069 1562 aa30.85■■■□□ 2.53
LONRF3-202ENST00000371628 CECR2Q9BXF3 1484 aa30.83■■■□□ 2.53
LONRF3-202ENST00000371628 MROH2BQ7Z745 1585 aa30.8■■■□□ 2.52
LONRF3-202ENST00000371628 EHMT2Q96KQ7 1210 aa30.68■■■□□ 2.5
LONRF3-202ENST00000371628 WIZO95785 1651 aa30.66■■■□□ 2.5
LONRF3-202ENST00000371628 BAZ1AQ9NRL2 1556 aaPredicted RBP30.55■■■□□ 2.48
LONRF3-202ENST00000371628 EIF4G1Q04637 1599 aaKnown RBP30.49■■■□□ 2.47
LONRF3-202ENST00000371628 PELP1Q8IZL8 1130 aaKnown RBP30.44■■■□□ 2.46
LONRF3-202ENST00000371628 SCAF1Q9H7N4 1312 aaKnown RBP30.4■■■□□ 2.46
LONRF3-202ENST00000371628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.26■■■□□ 2.44
LONRF3-202ENST00000371628 CCER1Q8TC90 406 aaPredicted RBP30.25■■■□□ 2.43
LONRF3-202ENST00000371628 TOP2AP11388 1531 aaKnown RBP30.22■■■□□ 2.43
LONRF3-202ENST00000371628 WRNQ14191 1432 aaPredicted RBP eCLIP30.19■■■□□ 2.42
LONRF3-202ENST00000371628 ABCC8Q09428 1581 aa30.13■■■□□ 2.41
LONRF3-202ENST00000371628 CCDC88BA6NC98 1476 aa30.11■■■□□ 2.41
LONRF3-202ENST00000371628 SMARCA4P51532 1647 aa30.08■■■□□ 2.41
LONRF3-202ENST00000371628 CEP162Q5TB80 1403 aa30.05■■■□□ 2.4
LONRF3-202ENST00000371628 SMARCA2P51531 1590 aa30.05■■■□□ 2.4
LONRF3-202ENST00000371628 ACIN1Q9UKV3 1341 aaKnown RBP30■■■□□ 2.39
LONRF3-202ENST00000371628 TNIKQ9UKE5 1360 aa29.99■■■□□ 2.39
LONRF3-202ENST00000371628 EEA1Q15075 1411 aa29.95■■■□□ 2.38
LONRF3-202ENST00000371628 SOGA1O94964 1423 aa29.94■■■□□ 2.38
LONRF3-202ENST00000371628 DIEXFQ68CQ4 756 aaKnown RBP29.93■■■□□ 2.38
LONRF3-202ENST00000371628 NEUROD1Q13562 356 aa29.88■■■□□ 2.37
LONRF3-202ENST00000371628 TTBK1Q5TCY1 1321 aaPredicted RBP29.84■■■□□ 2.37
LONRF3-202ENST00000371628 CSRNP3Q8WYN3 585 aa29.83■■■□□ 2.37
LONRF3-202ENST00000371628 UNC13AQ9UPW8 1703 aa29.79■■■□□ 2.36
LONRF3-202ENST00000371628 CENPBP07199 599 aaPredicted RBP29.79■■■□□ 2.36
LONRF3-202ENST00000371628 RUSC2Q8N2Y8 1516 aa29.75■■■□□ 2.35
LONRF3-202ENST00000371628 GOLGA3Q08378 1498 aa29.74■■■□□ 2.35
LONRF3-202ENST00000371628 UBTFP17480 764 aaKnown RBP29.73■■■□□ 2.35
LONRF3-202ENST00000371628 GTF3C3Q9Y5Q9 886 aa29.63■■■□□ 2.33
LONRF3-202ENST00000371628 ZNF316A6NFI3 1004 aaPredicted RBP29.59■■■□□ 2.33
LONRF3-202ENST00000371628 CEP164Q9UPV0 1460 aa29.52■■■□□ 2.32
LONRF3-202ENST00000371628 KIF21BO75037 1637 aa29.5■■■□□ 2.31
LONRF3-202ENST00000371628 PEG3Q9GZU2 1588 aa29.5■■■□□ 2.31
LONRF3-202ENST00000371628 SYNJ1O43426 1573 aa29.43■■■□□ 2.3
LONRF3-202ENST00000371628 CLIP1P30622 1438 aa29.4■■■□□ 2.3
LONRF3-202ENST00000371628 BICRAQ9NZM4 1560 aa29.39■■■□□ 2.3
LONRF3-202ENST00000371628 VPS8Q8N3P4 1428 aa29.35■■■□□ 2.29
LONRF3-202ENST00000371628 BAZ1BQ9UIG0 1483 aaKnown RBP29.33■■■□□ 2.29
LONRF3-202ENST00000371628 HNRNPUL2Q1KMD3 747 aaKnown RBP29.33■■■□□ 2.29
LONRF3-202ENST00000371628 PABPN1Q86U42 306 aaKnown RBP eCLIP29.3■■■□□ 2.28
LONRF3-202ENST00000371628 APLP2Q06481 763 aa29.21■■■□□ 2.27
LONRF3-202ENST00000371628 RAPGEF2Q9Y4G8 1499 aa29.2■■■□□ 2.27
LONRF3-202ENST00000371628 MIER1Q8N108 512 aa29.19■■■□□ 2.26
LONRF3-202ENST00000371628 YTHDC1Q96MU7 727 aaKnown RBP29.19■■■□□ 2.26
LONRF3-202ENST00000371628 ATAD2BQ9ULI0 1458 aa29.18■■■□□ 2.26
LONRF3-202ENST00000371628 MYT1Q01538 1121 aa29.06■■■□□ 2.24
LONRF3-202ENST00000371628 TOP2BQ02880 1626 aa29.05■■■□□ 2.24
LONRF3-202ENST00000371628 CLSPNQ9HAW4 1339 aa29■■■□□ 2.23
LONRF3-202ENST00000371628 ERICH3Q5RHP9 1530 aa28.96■■■□□ 2.23
LONRF3-202ENST00000371628 RANGAP1P46060 587 aaPredicted RBP28.95■■■□□ 2.23
LONRF3-202ENST00000371628 BIVM-ERCC5R4GMW8 1640 aa28.94■■■□□ 2.22
LONRF3-202ENST00000371628 PRXQ9BXM0 1461 aa28.89■■■□□ 2.22
LONRF3-202ENST00000371628 DHX57Q6P158 1386 aaKnown RBP28.88■■■□□ 2.21
LONRF3-202ENST00000371628 ARAP1Q96P48 1450 aa28.87■■■□□ 2.21
LONRF3-202ENST00000371628 RRBP1Q9P2E9 1410 aaKnown RBP28.74■■■□□ 2.19
LONRF3-202ENST00000371628 KANK4Q5T7N3 995 aaPredicted RBP28.73■■■□□ 2.19
LONRF3-202ENST00000371628 CUX2O14529 1486 aa28.67■■■□□ 2.18
LONRF3-202ENST00000371628 KIF27Q86VH2 1401 aa28.65■■■□□ 2.18
LONRF3-202ENST00000371628 CUX1P39880 1505 aa28.65■■■□□ 2.18
LONRF3-202ENST00000371628 HMGXB3Q12766 1538 aa28.59■■■□□ 2.17
LONRF3-202ENST00000371628 CCNB3Q8WWL7 1395 aa28.58■■■□□ 2.17
LONRF3-202ENST00000371628 ARHGAP35Q9NRY4 1499 aa28.54■■■□□ 2.16
LONRF3-202ENST00000371628 NCAPD3P42695 1498 aa28.54■■■□□ 2.16
LONRF3-202ENST00000371628 SUPT16HQ9Y5B9 1047 aaKnown RBP28.47■■■□□ 2.15
LONRF3-202ENST00000371628 CFTRP13569 1480 aa28.45■■■□□ 2.14
LONRF3-202ENST00000371628 MAP3K1Q13233 1512 aa28.37■■■□□ 2.13
LONRF3-202ENST00000371628 RAB3GAP2Q9H2M9 1393 aa28.37■■■□□ 2.13
LONRF3-202ENST00000371628 ITGAEP38570 1179 aa28.35■■■□□ 2.13
LONRF3-202ENST00000371628 MAPKBP1O60336 1514 aa28.34■■■□□ 2.13
LONRF3-202ENST00000371628 TIAM1Q13009 1591 aa28.34■■■□□ 2.13
LONRF3-202ENST00000371628 IGF1RP08069 1367 aa28.27■■■□□ 2.12
LONRF3-202ENST00000371628 PRDM2Q13029 1718 aa28.26■■■□□ 2.12
LONRF3-202ENST00000371628 SETD5Q9C0A6 1442 aa28.25■■■□□ 2.11
LONRF3-202ENST00000371628 LRRC9Q6ZRR7 1453 aa28.22■■■□□ 2.11
LONRF3-202ENST00000371628 CARMIL1Q5VZK9 1371 aa28.17■■■□□ 2.1
LONRF3-202ENST00000371628 PHLDB1Q86UU1 1377 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms