Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 TMEM205-206ENST00000586701 563 ntTSL 514.02□□□□□ -0.172e-9■■□□□ 13
NCBP2P52298 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.172e-9■■□□□ 13
NCBP2P52298 USP36-210ENST00000588086 3187 ntAPPRIS ALT2 TSL 1 (best)13.86□□□□□ -0.191e-6■■□□□ 13
NCBP2P52298 TMEM205-209ENST00000588321 1310 ntTSL 513.79□□□□□ -0.22e-9■■□□□ 13
NCBP2P52298 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.232e-9■■□□□ 13
NCBP2P52298 DEAF1-206ENST00000526857 567 ntTSL 313.54□□□□□ -0.245e-7■■□□□ 13
NCBP2P52298 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.52□□□□□ -0.251e-6■■□□□ 13
NCBP2P52298 BCL2L12-207ENST00000598979 893 ntTSL 313.43□□□□□ -0.262e-9■■□□□ 13
NCBP2P52298 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.42□□□□□ -0.262e-9■■□□□ 13
NCBP2P52298 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.35□□□□□ -0.272e-9■■□□□ 13
NCBP2P52298 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.26□□□□□ -0.291e-6■■□□□ 13
NCBP2P52298 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.322e-9■■□□□ 13
NCBP2P52298 SYVN1-210ENST00000528487 775 ntTSL 512.98□□□□□ -0.332e-9■■□□□ 13
NCBP2P52298 DEAF1-203ENST00000525626 585 ntTSL 312.94□□□□□ -0.345e-7■■□□□ 13
NCBP2P52298 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.371e-6■■□□□ 13
NCBP2P52298 USP36-222ENST00000592275 594 ntTSL 412.67□□□□□ -0.381e-6■■□□□ 13
NCBP2P52298 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.41e-6■■□□□ 13
NCBP2P52298 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.37□□□□□ -0.431e-6■■□□□ 13
NCBP2P52298 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.431e-6■■□□□ 13
NCBP2P52298 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.443e-12■■□□□ 13
NCBP2P52298 CTDSP1-208ENST00000482272 984 ntTSL 212.22□□□□□ -0.451e-11■■□□□ 13
NCBP2P52298 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.471e-6■■□□□ 13
NCBP2P52298 GAPDH-209ENST00000492719 930 ntTSL 312.09□□□□□ -0.471e-6■■□□□ 13
NCBP2P52298 CTIF-210ENST00000591412 491 ntTSL 312.07□□□□□ -0.481e-6■■□□□ 13
NCBP2P52298 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.482e-9■■□□□ 13
NCBP2P52298 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.51e-6■■□□□ 13
NCBP2P52298 CTDSP1-206ENST00000464255 926 ntTSL 511.9□□□□□ -0.51e-11■■□□□ 13
NCBP2P52298 GAPDH-208ENST00000474249 1333 ntTSL 511.78□□□□□ -0.521e-6■■□□□ 13
NCBP2P52298 BCL2L12-213ENST00000619007 1630 ntTSL 1 (best) BASIC11.71□□□□□ -0.542e-9■■□□□ 13
NCBP2P52298 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.593e-12■■□□□ 13
NCBP2P52298 TMEM205-204ENST00000586218 593 ntTSL 2 BASIC11.36□□□□□ -0.592e-9■■□□□ 13
NCBP2P52298 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC10.99□□□□□ -0.651e-6■■□□□ 13
NCBP2P52298 CUL1-203ENST00000602748 3054 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.652e-9■■□□□ 13
NCBP2P52298 TMEM205-213ENST00000590788 393 ntTSL 310.89□□□□□ -0.672e-9■■□□□ 13
NCBP2P52298 SYVN1-204ENST00000449943 4547 ntTSL 210.69□□□□□ -0.72e-9■■□□□ 13
NCBP2P52298 GAPDH-207ENST00000466588 1363 ntTSL 510.33□□□□□ -0.761e-6■■□□□ 13
NCBP2P52298 TMEM205-215ENST00000592952 428 ntTSL 510.05□□□□□ -0.82e-9■■□□□ 13
NCBP2P52298 POLI-204ENST00000577612 585 ntTSL 39.76□□□□□ -0.851e-6■■□□□ 13
NCBP2P52298 TAF1B-211ENST00000625239 273 ntTSL 5 BASIC9.74□□□□□ -0.851e-6■■□□□ 13
NCBP2P52298 CUL1-202ENST00000409469 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.92e-9■■□□□ 13
NCBP2P52298 TMEM205-212ENST00000590482 619 ntTSL 59.35□□□□□ -0.912e-9■■□□□ 13
NCBP2P52298 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.963e-12■■□□□ 13
NCBP2P52298 TAF1B-202ENST00000402170 715 ntTSL 58.86□□□□□ -0.991e-6■■□□□ 13
NCBP2P52298 ACADVL-230ENST00000582379 833 ntTSL 38.53□□□□□ -1.041e-6■■□□□ 13
NCBP2P52298 C15orf40-206ENST00000510873 287 ntTSL 28.25□□□□□ -1.091e-6■■□□□ 13
NCBP2P52298 C15orf40-209ENST00000538348 561 ntTSL 2 BASIC8.17□□□□□ -1.11e-6■■□□□ 13
NCBP2P52298 SPATS2L-207ENST00000409397 920 ntTSL 38.09□□□□□ -1.111e-6■■□□□ 13
NCBP2P52298 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC7.35□□□□□ -1.231e-6■■□□□ 13
NCBP2P52298 TAF1B-205ENST00000434858 1592 ntTSL 27.3□□□□□ -1.241e-6■■□□□ 13
NCBP2P52298 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.253e-12■■□□□ 13
NCBP2P52298 C15orf40-204ENST00000506912 1077 ntTSL 1 (best)7.16□□□□□ -1.261e-6■■□□□ 13
NCBP2P52298 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.331e-6■■□□□ 13
NCBP2P52298 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.391e-6■■□□□ 13
NCBP2P52298 C15orf40-205ENST00000508990 631 ntTSL 26.13□□□□□ -1.431e-6■■□□□ 13
NCBP2P52298 ZFAND3-207ENST00000474522 563 ntTSL 55.59□□□□□ -1.511e-6■■□□□ 13
NCBP2P52298 STX3-208ENST00000641815 3236 ntBASIC4.57□□□□□ -1.681e-6■■□□□ 13
NCBP2P52298 TAF1B-210ENST00000497182 642 ntTSL 23.87□□□□□ -1.791e-6■■□□□ 13
NCBP2P52298 TAF1B-204ENST00000416181 297 ntTSL 32.7□□□□□ -1.981e-6■■□□□ 13
NCBP2P52298 FEZ2-202ENST00000357996 847 ntTSL 52.07□□□□□ -2.081e-6■■□□□ 13
NCBP2P52298 NEU1-208ENST00000491768 1875 ntTSL 518.33■□□□□ 0.536e-20■■□□□ 13
NCBP2P52298 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.296e-20■■□□□ 13
NCBP2P52298 NEU1-207ENST00000480384 2214 ntTSL 216.74■□□□□ 0.276e-20■■□□□ 13
NCBP2P52298 NEU1-209ENST00000495807 4616 ntTSL 212.63□□□□□ -0.396e-20■■□□□ 13
NCBP2P52298 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.694e-8■■□□□ 13
NCBP2P52298 PANK2-202ENST00000336066 1843 ntTSL 1 (best)23.47■■□□□ 1.354e-8■■□□□ 13
NCBP2P52298 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.014e-8■■□□□ 13
NCBP2P52298 PANK2-205ENST00000495692 967 ntTSL 317.42■□□□□ 0.384e-8■■□□□ 13
NCBP2P52298 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC11.72□□□□□ -0.534e-8■■□□□ 13
NCBP2P52298 YTHDF3-206ENST00000612880 593 ntTSL 219.11■□□□□ 0.658e-9■■□□□ 13
NCBP2P52298 YTHDF3-204ENST00000522282 445 ntTSL 319.11■□□□□ 0.658e-9■■□□□ 13
NCBP2P52298 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.138e-9■■□□□ 13
NCBP2P52298 YTHDF3-203ENST00000519428 676 ntTSL 214.71□□□□□ -0.058e-9■■□□□ 13
NCBP2P52298 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.32□□□□□ -0.128e-9■■□□□ 13
NCBP2P52298 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.3□□□□□ -0.128e-9■■□□□ 13
NCBP2P52298 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.178e-9■■□□□ 13
NCBP2P52298 YTHDF3-208ENST00000615676 5092 ntTSL 1 (best)13.39□□□□□ -0.278e-9■■□□□ 13
NCBP2P52298 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.29□□□□□ -0.288e-9■■□□□ 13
NCBP2P52298 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.43□□□□□ -0.428e-9■■□□□ 13
NCBP2P52298 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.78■■□□□ 1.081e-7■■□□□ 13
NCBP2P52298 D2HGDH-202ENST00000400769 2277 ntTSL 221.16■□□□□ 0.981e-7■■□□□ 13
NCBP2P52298 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.741e-7■■□□□ 13
NCBP2P52298 D2HGDH-206ENST00000436747 4549 ntTSL 1 (best)16.76■□□□□ 0.271e-7■■□□□ 13
NCBP2P52298 CUX1-210ENST00000497815 947 ntTSL 211.12□□□□□ -0.632e-6■■□□□ 13
NCBP2P52298 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC10.92□□□□□ -0.662e-6■■□□□ 13
NCBP2P52298 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC10.52□□□□□ -0.732e-6■■□□□ 13
NCBP2P52298 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC10.13□□□□□ -0.792e-6■■□□□ 13
NCBP2P52298 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC10.07□□□□□ -0.82e-6■■□□□ 13
NCBP2P52298 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC10.07□□□□□ -0.82e-6■■□□□ 13
NCBP2P52298 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.882e-6■■□□□ 13
NCBP2P52298 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC8.94□□□□□ -0.982e-6■■□□□ 13
NCBP2P52298 CUX1-220ENST00000607092 559 ntTSL 35.62□□□□□ -1.512e-6■■□□□ 13
NCBP2P52298 AFDN-209ENST00000400825 963 ntTSL 525.62■■□□□ 1.694e-12■■□□□ 13
NCBP2P52298 AFDN-208ENST00000400824 875 ntTSL 523.49■■□□□ 1.354e-12■■□□□ 13
NCBP2P52298 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.39■■□□□ 1.174e-12■■□□□ 13
NCBP2P52298 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.58■□□□□ 0.724e-12■■□□□ 13
NCBP2P52298 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.06□□□□□ -0.164e-12■■□□□ 13
NCBP2P52298 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC13.05□□□□□ -0.324e-12■■□□□ 13
NCBP2P52298 RHOT2-202ENST00000561711 644 ntTSL 319.88■□□□□ 0.777e-7■■□□□ 13
NCBP2P52298 PIEZO1-209ENST00000490756 446 ntTSL 318.45■□□□□ 0.547e-7■■□□□ 13
NCBP2P52298 RHOT2-221ENST00000569358 1273 ntTSL 518.1■□□□□ 0.497e-7■■□□□ 13
Retrieved 100 of 18,329 protein–RNA pairs in 112.6 ms