RNA–Protein interactions for RNA: ENST00000506912.6

C15orf40-204, Transcript of chromosome 15 open reading frame 40, humanhuman

TSL 1 (best)

Gene C15orf40, Length 1,077 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf40-204ENST00000506912 NISCHQ9Y2I1 1504 aa17.66■□□□□ 0.42
C15orf40-204ENST00000506912 CCDC180Q9P1Z9 1646 aa15.57■□□□□ 0.08
C15orf40-204ENST00000506912 AEBP2Q6ZN18 517 aaPredicted RBP15.32■□□□□ 0.04
C15orf40-204ENST00000506912 CHIC1Q5VXU3 224 aa15.05■□□□□ -0
C15orf40-204ENST00000506912 ZCCHC6Q5VYS8 1495 aaKnown RBP14.88□□□□□ -0.03
C15orf40-204ENST00000506912 ABCC9O60706 1549 aa14.63□□□□□ -0.07
C15orf40-204ENST00000506912 DCAF1Q9Y4B6 1507 aa14.6□□□□□ -0.07
C15orf40-204ENST00000506912 MYO15BQ96JP2 1530 aa14.43□□□□□ -0.1
C15orf40-204ENST00000506912 NACADO15069 1562 aa14.39□□□□□ -0.11
C15orf40-204ENST00000506912 DCAF8L2P0C7V8 631 aa14.36□□□□□ -0.11
C15orf40-204ENST00000506912 SHROOM4Q9ULL8 1493 aa14.31□□□□□ -0.12
C15orf40-204ENST00000506912 RB1CC1Q8TDY2 1594 aa14.3□□□□□ -0.12
C15orf40-204ENST00000506912 SCRIBQ14160 1630 aa14.29□□□□□ -0.12
C15orf40-204ENST00000506912 UNC13AQ9UPW8 1703 aa14.24□□□□□ -0.13
C15orf40-204ENST00000506912 SLC24A1O60721 1099 aa13.99□□□□□ -0.17
C15orf40-204ENST00000506912 BICRAQ9NZM4 1560 aa13.93□□□□□ -0.18
C15orf40-204ENST00000506912 CECR2Q9BXF3 1484 aa13.72□□□□□ -0.21
C15orf40-204ENST00000506912 SMARCA4P51532 1647 aa13.68□□□□□ -0.22
C15orf40-204ENST00000506912 PABPN1Q86U42 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
C15orf40-204ENST00000506912 MROH2BQ7Z745 1585 aa13.66□□□□□ -0.22
C15orf40-204ENST00000506912 BAZ1AQ9NRL2 1556 aaPredicted RBP13.65□□□□□ -0.22
C15orf40-204ENST00000506912 SUPT5HO00267 1087 aaKnown RBP13.62□□□□□ -0.23
C15orf40-204ENST00000506912 RSF1Q96T23 1441 aaPredicted RBP13.62□□□□□ -0.23
C15orf40-204ENST00000506912 WIZO95785 1651 aa13.62□□□□□ -0.23
C15orf40-204ENST00000506912 EIF4G1Q04637 1599 aaKnown RBP13.49□□□□□ -0.25
C15orf40-204ENST00000506912 PEG3Q9GZU2 1588 aa13.48□□□□□ -0.25
C15orf40-204ENST00000506912 EHMT2Q96KQ7 1210 aa13.47□□□□□ -0.25
C15orf40-204ENST00000506912 TOP2AP11388 1531 aaKnown RBP13.44□□□□□ -0.26
C15orf40-204ENST00000506912 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
C15orf40-204ENST00000506912 ATAD2BQ9ULI0 1458 aa13.36□□□□□ -0.27
C15orf40-204ENST00000506912 CC2D2AQ9P2K1 1620 aa13.31□□□□□ -0.28
C15orf40-204ENST00000506912 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
C15orf40-204ENST00000506912 BAZ1BQ9UIG0 1483 aaKnown RBP13.29□□□□□ -0.28
C15orf40-204ENST00000506912 PHF23Q9BUL5 403 aaPredicted RBP13.23□□□□□ -0.29
C15orf40-204ENST00000506912 CCDC88BA6NC98 1476 aa13.22□□□□□ -0.29
C15orf40-204ENST00000506912 NCAPD3P42695 1498 aa13.2□□□□□ -0.3
C15orf40-204ENST00000506912 PRDM2Q13029 1718 aa13.14□□□□□ -0.31
C15orf40-204ENST00000506912 SENP3Q9H4L4 574 aaPredicted RBP13.02□□□□□ -0.33
C15orf40-204ENST00000506912 ABCC8Q09428 1581 aa13.02□□□□□ -0.33
C15orf40-204ENST00000506912 CFTRP13569 1480 aa12.92□□□□□ -0.34
C15orf40-204ENST00000506912 SYNJ1O43426 1573 aa12.92□□□□□ -0.34
C15orf40-204ENST00000506912 BIVM-ERCC5R4GMW8 1640 aa12.88□□□□□ -0.35
C15orf40-204ENST00000506912 DNAJC5BQ9UF47 199 aa12.88□□□□□ -0.35
C15orf40-204ENST00000506912 LAMC3Q9Y6N6 1575 aa12.86□□□□□ -0.35
C15orf40-204ENST00000506912 NESP48681 1621 aa12.86□□□□□ -0.35
C15orf40-204ENST00000506912 KIF21AQ7Z4S6 1674 aa12.86□□□□□ -0.35
C15orf40-204ENST00000506912 PLPPR3Q6T4P5 718 aa12.83□□□□□ -0.36
C15orf40-204ENST00000506912 TOP2BQ02880 1626 aa12.83□□□□□ -0.36
C15orf40-204ENST00000506912 CADPSQ9ULU8 1353 aa12.82□□□□□ -0.36
C15orf40-204ENST00000506912 WRNQ14191 1432 aaPredicted RBP eCLIP12.82□□□□□ -0.36
C15orf40-204ENST00000506912 CUX1P39880 1505 aa12.81□□□□□ -0.36
C15orf40-204ENST00000506912 RTN4Q9NQC3 1192 aaKnown RBP12.79□□□□□ -0.36
C15orf40-204ENST00000506912 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
C15orf40-204ENST00000506912 FANCD2Q9BXW9 1451 aa12.77□□□□□ -0.37
C15orf40-204ENST00000506912 AMER1Q5JTC6 1135 aaPredicted RBP12.72□□□□□ -0.37
C15orf40-204ENST00000506912 DNMBPQ6XZF7 1577 aa12.72□□□□□ -0.37
C15orf40-204ENST00000506912 CEP164Q9UPV0 1460 aa12.72□□□□□ -0.37
C15orf40-204ENST00000506912 WDR97A6NE52 1622 aa12.68□□□□□ -0.38
C15orf40-204ENST00000506912 URB2Q14146 1524 aaKnown RBP12.66□□□□□ -0.38
C15orf40-204ENST00000506912 TOPBP1Q92547 1522 aa12.66□□□□□ -0.38
C15orf40-204ENST00000506912 SOGA1O94964 1423 aa12.65□□□□□ -0.38
C15orf40-204ENST00000506912 FGD5Q6ZNL6 1462 aa12.65□□□□□ -0.38
C15orf40-204ENST00000506912 RUSC2Q8N2Y8 1516 aa12.64□□□□□ -0.39
C15orf40-204ENST00000506912 THOC2Q8NI27 1593 aaKnown RBP12.64□□□□□ -0.39
C15orf40-204ENST00000506912 PDS5BQ9NTI5 1447 aa12.63□□□□□ -0.39
C15orf40-204ENST00000506912 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
C15orf40-204ENST00000506912 POLA1P09884 1462 aaPredicted RBP12.59□□□□□ -0.39
C15orf40-204ENST00000506912 FAM9AQ8IZU1 332 aaPredicted RBP12.58□□□□□ -0.4
C15orf40-204ENST00000506912 MRC2Q9UBG0 1479 aa12.58□□□□□ -0.4
C15orf40-204ENST00000506912 EEA1Q15075 1411 aa12.57□□□□□ -0.4
C15orf40-204ENST00000506912 KIF21BO75037 1637 aa12.57□□□□□ -0.4
C15orf40-204ENST00000506912 WDR62O43379 1518 aa12.57□□□□□ -0.4
C15orf40-204ENST00000506912 KCNA4P22459 653 aa12.56□□□□□ -0.4
C15orf40-204ENST00000506912 TARBP1Q13395 1621 aaKnown RBP12.54□□□□□ -0.4
C15orf40-204ENST00000506912 ABCA5Q8WWZ7 1642 aa12.54□□□□□ -0.4
C15orf40-204ENST00000506912 RAD54L2Q9Y4B4 1467 aa12.53□□□□□ -0.4
C15orf40-204ENST00000506912 NCBP3Q53F19 620 aaKnown RBP12.52□□□□□ -0.41
C15orf40-204ENST00000506912 ERCC6Q03468 1493 aa12.52□□□□□ -0.41
C15orf40-204ENST00000506912 PBRM1Q86U86 1689 aa12.51□□□□□ -0.41
C15orf40-204ENST00000506912 CUX2O14529 1486 aa12.51□□□□□ -0.41
C15orf40-204ENST00000506912 ABCA10Q8WWZ4 1543 aa12.51□□□□□ -0.41
C15orf40-204ENST00000506912 LOC105371045A0A1W2PR82 267 aa12.49□□□□□ -0.41
C15orf40-204ENST00000506912 KIF27Q86VH2 1401 aa12.47□□□□□ -0.41
C15orf40-204ENST00000506912 GOLGA3Q08378 1498 aa12.46□□□□□ -0.41
C15orf40-204ENST00000506912 DAXXQ9UER7 740 aaPredicted RBP12.45□□□□□ -0.42
C15orf40-204ENST00000506912 ERICH3Q5RHP9 1530 aa12.45□□□□□ -0.42
C15orf40-204ENST00000506912 CUL7Q14999 1698 aa12.45□□□□□ -0.42
C15orf40-204ENST00000506912 RAPGEF2Q9Y4G8 1499 aa12.43□□□□□ -0.42
C15orf40-204ENST00000506912 EIF4G3O43432 1585 aaKnown RBP12.43□□□□□ -0.42
C15orf40-204ENST00000506912 PRXQ9BXM0 1461 aa12.42□□□□□ -0.42
C15orf40-204ENST00000506912 CTTNBP2Q8WZ74 1663 aa12.39□□□□□ -0.43
C15orf40-204ENST00000506912 IFT140Q96RY7 1462 aa12.38□□□□□ -0.43
C15orf40-204ENST00000506912 ADAMTS12P58397 1594 aa12.38□□□□□ -0.43
C15orf40-204ENST00000506912 ZNF608Q9ULD9 1512 aaPredicted RBP12.36□□□□□ -0.43
C15orf40-204ENST00000506912 GAPVD1Q14C86 1478 aa12.35□□□□□ -0.43
C15orf40-204ENST00000506912 CEP162Q5TB80 1403 aa12.34□□□□□ -0.43
C15orf40-204ENST00000506912 IGF1RP08069 1367 aa12.32□□□□□ -0.44
C15orf40-204ENST00000506912 TDRD9Q8NDG6 1382 aaKnown RBP12.32□□□□□ -0.44
C15orf40-204ENST00000506912 TNIKQ9UKE5 1360 aa12.32□□□□□ -0.44
C15orf40-204ENST00000506912 AQRO60306 1485 aaKnown RBP eCLIP12.29□□□□□ -0.446e-6■■■■□ 25.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms