RNA–Protein interactions for RNA: ENST00000396861.5

GAPDH-205, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GAPDH, Length 1,348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-205ENST00000396861 NISCHQ9Y2I1 1504 aa31.22■■■□□ 2.59
GAPDH-205ENST00000396861 CCDC180Q9P1Z9 1646 aa27.72■■■□□ 2.03
GAPDH-205ENST00000396861 ABCC9O60706 1549 aa27.55■■■□□ 2
GAPDH-205ENST00000396861 DNAJC5BQ9UF47 199 aa26.41■■□□□ 1.82
GAPDH-205ENST00000396861 RB1CC1Q8TDY2 1594 aa26.03■■□□□ 1.76
GAPDH-205ENST00000396861 DCAF8L2P0C7V8 631 aa26.03■■□□□ 1.76
GAPDH-205ENST00000396861 NACADO15069 1562 aa26.02■■□□□ 1.76
GAPDH-205ENST00000396861 ZCCHC6Q5VYS8 1495 aaKnown RBP26.01■■□□□ 1.75
GAPDH-205ENST00000396861 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
GAPDH-205ENST00000396861 DCAF1Q9Y4B6 1507 aa25.82■■□□□ 1.72
GAPDH-205ENST00000396861 PABPN1Q86U42 306 aaKnown RBP eCLIP25.58■■□□□ 1.69
GAPDH-205ENST00000396861 UNC13AQ9UPW8 1703 aa25.56■■□□□ 1.68
GAPDH-205ENST00000396861 SCRIBQ14160 1630 aa25.3■■□□□ 1.64
GAPDH-205ENST00000396861 BICRAQ9NZM4 1560 aa25.29■■□□□ 1.64
GAPDH-205ENST00000396861 SHROOM4Q9ULL8 1493 aa24.95■■□□□ 1.58
GAPDH-205ENST00000396861 CECR2Q9BXF3 1484 aa24.88■■□□□ 1.57
GAPDH-205ENST00000396861 CC2D2AQ9P2K1 1620 aa24.88■■□□□ 1.57
GAPDH-205ENST00000396861 EIF4G1Q04637 1599 aaKnown RBP24.68■■□□□ 1.54
GAPDH-205ENST00000396861 DNAJC5Q9H3Z4 198 aa24.63■■□□□ 1.53
GAPDH-205ENST00000396861 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
GAPDH-205ENST00000396861 BAZ1AQ9NRL2 1556 aaPredicted RBP24.17■■□□□ 1.46
GAPDH-205ENST00000396861 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
GAPDH-205ENST00000396861 ATAD2BQ9ULI0 1458 aa24.04■■□□□ 1.44
GAPDH-205ENST00000396861 NCAPD3P42695 1498 aa24.01■■□□□ 1.43
GAPDH-205ENST00000396861 SMARCA2P51531 1590 aa24■■□□□ 1.43
GAPDH-205ENST00000396861 PEG3Q9GZU2 1588 aa23.97■■□□□ 1.43
GAPDH-205ENST00000396861 CUX2O14529 1486 aa23.96■■□□□ 1.43
GAPDH-205ENST00000396861 HMGXB3Q12766 1538 aa23.9■■□□□ 1.42
GAPDH-205ENST00000396861 WIZO95785 1651 aa23.85■■□□□ 1.41
GAPDH-205ENST00000396861 BAZ1BQ9UIG0 1483 aaKnown RBP23.83■■□□□ 1.41
GAPDH-205ENST00000396861 RSF1Q96T23 1441 aaPredicted RBP23.81■■□□□ 1.4
GAPDH-205ENST00000396861 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
GAPDH-205ENST00000396861 AEBP2Q6ZN18 517 aaPredicted RBP23.72■■□□□ 1.39
GAPDH-205ENST00000396861 TOP2AP11388 1531 aaKnown RBP23.55■■□□□ 1.36
GAPDH-205ENST00000396861 NESP48681 1621 aa23.53■■□□□ 1.36
GAPDH-205ENST00000396861 THOC2Q8NI27 1593 aaKnown RBP23.39■■□□□ 1.34
GAPDH-205ENST00000396861 LAMC3Q9Y6N6 1575 aa23.37■■□□□ 1.33
GAPDH-205ENST00000396861 CADPSQ9ULU8 1353 aa23.31■■□□□ 1.32
GAPDH-205ENST00000396861 CCDC88BA6NC98 1476 aa23.28■■□□□ 1.32
GAPDH-205ENST00000396861 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
GAPDH-205ENST00000396861 TRIM41Q8WV44 630 aa23.27■■□□□ 1.32
GAPDH-205ENST00000396861 KIF21AQ7Z4S6 1674 aa23.2■■□□□ 1.31
GAPDH-205ENST00000396861 CFTRP13569 1480 aa23.2■■□□□ 1.3
GAPDH-205ENST00000396861 PDS5BQ9NTI5 1447 aa23.18■■□□□ 1.3
GAPDH-205ENST00000396861 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
GAPDH-205ENST00000396861 FANCD2Q9BXW9 1451 aa23.04■■□□□ 1.28
GAPDH-205ENST00000396861 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
GAPDH-205ENST00000396861 CEP164Q9UPV0 1460 aa22.99■■□□□ 1.27
GAPDH-205ENST00000396861 MRC2Q9UBG0 1479 aa22.97■■□□□ 1.27
GAPDH-205ENST00000396861 WDR62O43379 1518 aa22.94■■□□□ 1.26
GAPDH-205ENST00000396861 URB2Q14146 1524 aaKnown RBP22.83■■□□□ 1.25
GAPDH-205ENST00000396861 OSCARQ8IYS5 282 aa22.79■■□□□ 1.24
GAPDH-205ENST00000396861 TOPBP1Q92547 1522 aa22.7■■□□□ 1.22
GAPDH-205ENST00000396861 DNMBPQ6XZF7 1577 aa22.68■■□□□ 1.22
GAPDH-205ENST00000396861 ABCC8Q09428 1581 aa22.67■■□□□ 1.22
GAPDH-205ENST00000396861 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
GAPDH-205ENST00000396861 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
GAPDH-205ENST00000396861 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
GAPDH-205ENST00000396861 CUX1P39880 1505 aa22.57■■□□□ 1.2
GAPDH-205ENST00000396861 IFT140Q96RY7 1462 aa22.52■■□□□ 1.2
GAPDH-205ENST00000396861 POLA1P09884 1462 aaPredicted RBP22.51■■□□□ 1.19
GAPDH-205ENST00000396861 TARBP1Q13395 1621 aaKnown RBP22.47■■□□□ 1.19
GAPDH-205ENST00000396861 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
GAPDH-205ENST00000396861 ARHGEF11O15085 1522 aa22.43■■□□□ 1.18
GAPDH-205ENST00000396861 ZNF608Q9ULD9 1512 aaPredicted RBP22.43■■□□□ 1.18
GAPDH-205ENST00000396861 WRNQ14191 1432 aaPredicted RBP eCLIP22.43■■□□□ 1.18
GAPDH-205ENST00000396861 RAD54L2Q9Y4B4 1467 aa22.43■■□□□ 1.18
GAPDH-205ENST00000396861 BIVM-ERCC5R4GMW8 1640 aa22.42■■□□□ 1.18
GAPDH-205ENST00000396861 SYNJ1O43426 1573 aa22.41■■□□□ 1.18
GAPDH-205ENST00000396861 SOGA1O94964 1423 aa22.41■■□□□ 1.18
GAPDH-205ENST00000396861 TOP2BQ02880 1626 aa22.41■■□□□ 1.18
GAPDH-205ENST00000396861 EIF4G3O43432 1585 aaKnown RBP22.35■■□□□ 1.17
GAPDH-205ENST00000396861 WDR97A6NE52 1622 aa22.33■■□□□ 1.16
GAPDH-205ENST00000396861 AQRO60306 1485 aaKnown RBP eCLIP22.32■■□□□ 1.162e-13■■■■■ 33.3
GAPDH-205ENST00000396861 CYB5RLQ6IPT4 315 aa22.3■■□□□ 1.16
GAPDH-205ENST00000396861 TDRD9Q8NDG6 1382 aaKnown RBP22.28■■□□□ 1.16
GAPDH-205ENST00000396861 ABCA10Q8WWZ4 1543 aa22.24■■□□□ 1.15
GAPDH-205ENST00000396861 TRHP20396 242 aaPredicted RBP22.19■■□□□ 1.14
GAPDH-205ENST00000396861 ARAP1Q96P48 1450 aa22.18■■□□□ 1.14
GAPDH-205ENST00000396861 ABCA5Q8WWZ7 1642 aa22.17■■□□□ 1.14
GAPDH-205ENST00000396861 CHD1O14646 1710 aa22.17■■□□□ 1.14
GAPDH-205ENST00000396861 PBRM1Q86U86 1689 aa22.16■■□□□ 1.14
GAPDH-205ENST00000396861 GAPVD1Q14C86 1478 aa22.15■■□□□ 1.14
GAPDH-205ENST00000396861 GRIN2BQ13224 1484 aa22.13■■□□□ 1.13
GAPDH-205ENST00000396861 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
GAPDH-205ENST00000396861 MAGI1Q96QZ7 1491 aaPredicted RBP22.05■■□□□ 1.12
GAPDH-205ENST00000396861 FBLN2P98095 1184 aa22.03■■□□□ 1.12
GAPDH-205ENST00000396861 ERICH3Q5RHP9 1530 aa21.98■■□□□ 1.11
GAPDH-205ENST00000396861 SYNJ2O15056 1496 aa21.98■■□□□ 1.11
GAPDH-205ENST00000396861 CHMP7Q8WUX9 453 aaPredicted RBP21.96■■□□□ 1.11
GAPDH-205ENST00000396861 ADAMTS12P58397 1594 aa21.94■■□□□ 1.1
GAPDH-205ENST00000396861 KIF27Q86VH2 1401 aa21.94■■□□□ 1.1
GAPDH-205ENST00000396861 CLASP1Q7Z460 1538 aa21.9■■□□□ 1.1
GAPDH-205ENST00000396861 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.09
GAPDH-205ENST00000396861 IGF1RP08069 1367 aa21.87■■□□□ 1.09
GAPDH-205ENST00000396861 GRIN2AQ12879 1464 aa21.85■■□□□ 1.09
GAPDH-205ENST00000396861 RUSC2Q8N2Y8 1516 aa21.83■■□□□ 1.09
GAPDH-205ENST00000396861 CUL7Q14999 1698 aa21.81■■□□□ 1.08
GAPDH-205ENST00000396861 CEP170Q5SW79 1584 aa21.76■■□□□ 1.07
GAPDH-205ENST00000396861 NUP160Q12769 1436 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms