RNA–Protein interactions for RNA: ENST00000538348.6

C15orf40-209, Transcript of chromosome 15 open reading frame 40, humanhuman

TSL 2 BASIC

Gene C15orf40, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf40-209ENST00000538348 AEBP2Q6ZN18 517 aaPredicted RBP33.25■■■□□ 2.91
C15orf40-209ENST00000538348 CHIC1Q5VXU3 224 aa31.13■■■□□ 2.57
C15orf40-209ENST00000538348 SENP3Q9H4L4 574 aaPredicted RBP28.64■■■□□ 2.18
C15orf40-209ENST00000538348 PHF23Q9BUL5 403 aaPredicted RBP28.04■■■□□ 2.08
C15orf40-209ENST00000538348 POTEDQ86YR6 584 aa27.24■■□□□ 1.95
C15orf40-209ENST00000538348 FOXD1Q16676 465 aa26.8■■□□□ 1.88
C15orf40-209ENST00000538348 MSH5O43196 834 aa25.65■■□□□ 1.7
C15orf40-209ENST00000538348 PIAS4Q8N2W9 510 aaPredicted RBP24.8■■□□□ 1.56
C15orf40-209ENST00000538348 PPP6R1Q9UPN7 881 aa24.02■■□□□ 1.44
C15orf40-209ENST00000538348 ADRA2BP18089 450 aa23.91■■□□□ 1.42
C15orf40-209ENST00000538348 PLPPR3Q6T4P5 718 aa23.66■■□□□ 1.38
C15orf40-209ENST00000538348 NISCHQ9Y2I1 1504 aa23.5■■□□□ 1.35
C15orf40-209ENST00000538348 CACNB1Q02641 598 aaPredicted RBP22.85■■□□□ 1.25
C15orf40-209ENST00000538348 DMRT2Q9Y5R5 561 aa22.47■■□□□ 1.19
C15orf40-209ENST00000538348 MAPK8IP2Q13387 824 aaPredicted RBP22.34■■□□□ 1.17
C15orf40-209ENST00000538348 SCAF1Q9H7N4 1312 aaKnown RBP21.92■■□□□ 1.1
C15orf40-209ENST00000538348 DCAF8L1A6NGE4 600 aa21.74■■□□□ 1.07
C15orf40-209ENST00000538348 RNF39Q9H2S5 420 aa21.72■■□□□ 1.07
C15orf40-209ENST00000538348 C1QBPQ07021 282 aaKnown RBP21.35■■□□□ 1.01
C15orf40-209ENST00000538348 ABCC9O60706 1549 aa21.26■□□□□ 0.99
C15orf40-209ENST00000538348 POTEHQ6S545 545 aa21.12■□□□□ 0.97
C15orf40-209ENST00000538348 HOXD11P31277 338 aaPredicted RBP21.1■□□□□ 0.97
C15orf40-209ENST00000538348 CCDC180Q9P1Z9 1646 aa21.1■□□□□ 0.97
C15orf40-209ENST00000538348 RNF216Q9NWF9 866 aaPredicted RBP20.61■□□□□ 0.89
C15orf40-209ENST00000538348 DNAJC5BQ9UF47 199 aa20.61■□□□□ 0.89
C15orf40-209ENST00000538348 PPP4R3CPQ6ZMV5 832 aa20.55■□□□□ 0.88
C15orf40-209ENST00000538348 CNKSR2Q8WXI2 1034 aa20.47■□□□□ 0.87
C15orf40-209ENST00000538348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.2■□□□□ 0.82
C15orf40-209ENST00000538348 RB1CC1Q8TDY2 1594 aa20.16■□□□□ 0.82
C15orf40-209ENST00000538348 NACADO15069 1562 aa20.01■□□□□ 0.79
C15orf40-209ENST00000538348 DSG3P32926 999 aa19.9■□□□□ 0.78
C15orf40-209ENST00000538348 CAPN15O75808 1086 aa19.79■□□□□ 0.76
C15orf40-209ENST00000538348 DCAF8L2P0C7V8 631 aa19.78■□□□□ 0.76
C15orf40-209ENST00000538348 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
C15orf40-209ENST00000538348 MYO15BQ96JP2 1530 aa19.75■□□□□ 0.75
C15orf40-209ENST00000538348 SPINK5Q9NQ38 1064 aaPredicted RBP19.69■□□□□ 0.74
C15orf40-209ENST00000538348 UNC13AQ9UPW8 1703 aa19.68■□□□□ 0.74
C15orf40-209ENST00000538348 BICRAQ9NZM4 1560 aa19.66■□□□□ 0.74
C15orf40-209ENST00000538348 U3KPZ7 1027 aaPredicted RBP19.56■□□□□ 0.72
C15orf40-209ENST00000538348 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
C15orf40-209ENST00000538348 DCAF1Q9Y4B6 1507 aa19.43■□□□□ 0.7
C15orf40-209ENST00000538348 NCBP3Q53F19 620 aaKnown RBP19.4■□□□□ 0.7
C15orf40-209ENST00000538348 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
C15orf40-209ENST00000538348 CC2D2AQ9P2K1 1620 aa19.21■□□□□ 0.67
C15orf40-209ENST00000538348 SCRIBQ14160 1630 aa19.19■□□□□ 0.66
C15orf40-209ENST00000538348 ABCB7O75027 752 aa19.19■□□□□ 0.66
C15orf40-209ENST00000538348 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
C15orf40-209ENST00000538348 CHRDL2Q6WN34 429 aa19.17■□□□□ 0.66
C15orf40-209ENST00000538348 SP7Q8TDD2 431 aaPredicted RBP19.17■□□□□ 0.66
C15orf40-209ENST00000538348 EIF4G1Q04637 1599 aaKnown RBP19.15■□□□□ 0.66
C15orf40-209ENST00000538348 TRHP20396 242 aaPredicted RBP19.14■□□□□ 0.65
C15orf40-209ENST00000538348 RBM42Q9BTD8 480 aaKnown RBP19.09■□□□□ 0.65
C15orf40-209ENST00000538348 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
C15orf40-209ENST00000538348 ZNF219Q9P2Y4 722 aaPredicted RBP19.05■□□□□ 0.64
C15orf40-209ENST00000538348 APLP2Q06481 763 aa18.96■□□□□ 0.63
C15orf40-209ENST00000538348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.61■□□□□ 0.57
C15orf40-209ENST00000538348 HNRNPUL2Q1KMD3 747 aaKnown RBP18.61■□□□□ 0.57
C15orf40-209ENST00000538348 DNAJC5Q9H3Z4 198 aa18.61■□□□□ 0.57
C15orf40-209ENST00000538348 NCAPD3P42695 1498 aa18.53■□□□□ 0.56
C15orf40-209ENST00000538348 SLC4A2P04920 1241 aa18.53■□□□□ 0.56
C15orf40-209ENST00000538348 HAX1O00165 279 aa18.49■□□□□ 0.55
C15orf40-209ENST00000538348 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
C15orf40-209ENST00000538348 SAMD1Q6SPF0 538 aaPredicted RBP18.43■□□□□ 0.54
C15orf40-209ENST00000538348 PIP4P2Q8N4L2 257 aa18.41■□□□□ 0.54
C15orf40-209ENST00000538348 CUX2O14529 1486 aa18.39■□□□□ 0.54
C15orf40-209ENST00000538348 SMARCA4P51532 1647 aa18.34■□□□□ 0.53
C15orf40-209ENST00000538348 HMGXB3Q12766 1538 aa18.33■□□□□ 0.53
C15orf40-209ENST00000538348 AKT1S1Q96B36 256 aa18.33■□□□□ 0.52
C15orf40-209ENST00000538348 SMARCA2P51531 1590 aa18.31■□□□□ 0.52
C15orf40-209ENST00000538348 ERCC6Q03468 1493 aa18.3■□□□□ 0.52
C15orf40-209ENST00000538348 POLA2Q14181 598 aa18.27■□□□□ 0.52
C15orf40-209ENST00000538348 NESP48681 1621 aa18.25■□□□□ 0.51
C15orf40-209ENST00000538348 BAZ1AQ9NRL2 1556 aaPredicted RBP18.22■□□□□ 0.51
C15orf40-209ENST00000538348 PEG3Q9GZU2 1588 aa18.21■□□□□ 0.51
C15orf40-209ENST00000538348 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
C15orf40-209ENST00000538348 REM2Q8IYK8 340 aaPredicted RBP18.15■□□□□ 0.5
C15orf40-209ENST00000538348 MROH2BQ7Z745 1585 aa18.11■□□□□ 0.49
C15orf40-209ENST00000538348 THOC2Q8NI27 1593 aaKnown RBP18.09■□□□□ 0.49
C15orf40-209ENST00000538348 LAMC3Q9Y6N6 1575 aa18.07■□□□□ 0.48
C15orf40-209ENST00000538348 FXR2P51116 673 aaKnown RBP eCLIP18.06■□□□□ 0.48
C15orf40-209ENST00000538348 EVX2Q03828 476 aa18.06■□□□□ 0.48
C15orf40-209ENST00000538348 PLSCR2Q9NRY7 297 aa18.02■□□□□ 0.48
C15orf40-209ENST00000538348 PITPNM1O00562 1244 aa17.99■□□□□ 0.47
C15orf40-209ENST00000538348 LHX8Q68G74 356 aa17.97■□□□□ 0.47
C15orf40-209ENST00000538348 PDS5BQ9NTI5 1447 aa17.97■□□□□ 0.47
C15orf40-209ENST00000538348 KIF21AQ7Z4S6 1674 aa17.95■□□□□ 0.46
C15orf40-209ENST00000538348 CADPSQ9ULU8 1353 aa17.93■□□□□ 0.46
C15orf40-209ENST00000538348 ZBTB12Q9Y330 459 aaPredicted RBP17.85■□□□□ 0.45
C15orf40-209ENST00000538348 WIZO95785 1651 aa17.84■□□□□ 0.45
C15orf40-209ENST00000538348 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
C15orf40-209ENST00000538348 WDR62O43379 1518 aa17.82■□□□□ 0.44
C15orf40-209ENST00000538348 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
C15orf40-209ENST00000538348 CFTRP13569 1480 aa17.71■□□□□ 0.43
C15orf40-209ENST00000538348 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
C15orf40-209ENST00000538348 MYCNP04198 464 aaPredicted RBP17.7■□□□□ 0.42
C15orf40-209ENST00000538348 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
C15orf40-209ENST00000538348 FANCD2Q9BXW9 1451 aa17.69■□□□□ 0.42
C15orf40-209ENST00000538348 GABBR2O75899 941 aa17.62■□□□□ 0.41
C15orf40-209ENST00000538348 TOP2AP11388 1531 aaKnown RBP17.62■□□□□ 0.41
C15orf40-209ENST00000538348 TRIM41Q8WV44 630 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms