RNA–Protein interactions for RNA: ENST00000615676.1

YTHDF3-208, Transcript of YTH N6-methyladenosine RNA binding protein 3, humanhuman

TSL 1 (best)

Gene YTHDF3, Length 5,092 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3-208ENST00000615676 DCAF8L2P0C7V8 631 aa23.45■■□□□ 1.34
YTHDF3-208ENST00000615676 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
YTHDF3-208ENST00000615676 NISCHQ9Y2I1 1504 aa21.79■■□□□ 1.08
YTHDF3-208ENST00000615676 PELP1Q8IZL8 1130 aaKnown RBP21.71■■□□□ 1.07
YTHDF3-208ENST00000615676 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.05
YTHDF3-208ENST00000615676 APLP2Q06481 763 aa21.51■■□□□ 1.03
YTHDF3-208ENST00000615676 EHMT2Q96KQ7 1210 aa21.44■■□□□ 1.02
YTHDF3-208ENST00000615676 FAM9AQ8IZU1 332 aaPredicted RBP21.36■■□□□ 1.01
YTHDF3-208ENST00000615676 TTBK1Q5TCY1 1321 aaPredicted RBP20.75■□□□□ 0.91
YTHDF3-208ENST00000615676 CCER1Q8TC90 406 aaPredicted RBP20.74■□□□□ 0.91
YTHDF3-208ENST00000615676 PCGF6Q9BYE7 350 aa20.7■□□□□ 0.9
YTHDF3-208ENST00000615676 CENPBP07199 599 aaPredicted RBP20.7■□□□□ 0.9
YTHDF3-208ENST00000615676 ZEB1P37275 1124 aaPredicted RBP20.7■□□□□ 0.9
YTHDF3-208ENST00000615676 ERICH6Q7L0X2 663 aa20.68■□□□□ 0.9
YTHDF3-208ENST00000615676 TRIM41Q8WV44 630 aa20.62■□□□□ 0.89
YTHDF3-208ENST00000615676 RANGAP1P46060 587 aaPredicted RBP20.6■□□□□ 0.89
YTHDF3-208ENST00000615676 ATP1B4Q9UN42 357 aaPredicted RBP20.59■□□□□ 0.89
YTHDF3-208ENST00000615676 UBTFP17480 764 aaKnown RBP20.46■□□□□ 0.87
YTHDF3-208ENST00000615676 NEFLP07196 543 aa20.37■□□□□ 0.85
YTHDF3-208ENST00000615676 YTHDC1Q96MU7 727 aaKnown RBP20.03■□□□□ 0.8
YTHDF3-208ENST00000615676 MYT1Q01538 1121 aa19.99■□□□□ 0.79
YTHDF3-208ENST00000615676 MYT1LQ9UL68 1186 aa19.95■□□□□ 0.78
YTHDF3-208ENST00000615676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.9■□□□□ 0.78
YTHDF3-208ENST00000615676 HNRNPUL2Q1KMD3 747 aaKnown RBP19.9■□□□□ 0.78
YTHDF3-208ENST00000615676 TRIM26Q12899 539 aaPredicted RBP19.89■□□□□ 0.78
YTHDF3-208ENST00000615676 DAXXQ9UER7 740 aaPredicted RBP19.88■□□□□ 0.77
YTHDF3-208ENST00000615676 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
YTHDF3-208ENST00000615676 POLR3GLQ9BT43 218 aa19.77■□□□□ 0.76
YTHDF3-208ENST00000615676 ITGAEP38570 1179 aa19.77■□□□□ 0.75
YTHDF3-208ENST00000615676 HRCP23327 699 aa19.59■□□□□ 0.73
YTHDF3-208ENST00000615676 SLC4A1APQ9BWU0 796 aaKnown RBP19.5■□□□□ 0.71
YTHDF3-208ENST00000615676 CNGB1Q14028 1251 aaPredicted RBP19.44■□□□□ 0.7
YTHDF3-208ENST00000615676 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
YTHDF3-208ENST00000615676 LOC105371045A0A1W2PR82 267 aa19.41■□□□□ 0.7
YTHDF3-208ENST00000615676 CLSPNQ9HAW4 1339 aa19.38■□□□□ 0.69
YTHDF3-208ENST00000615676 ZNF316A6NFI3 1004 aaPredicted RBP19.36■□□□□ 0.69
YTHDF3-208ENST00000615676 RTL5Q5HYW3 569 aaPredicted RBP19.31■□□□□ 0.68
YTHDF3-208ENST00000615676 FAM50AQ14320 339 aaKnown RBP19.31■□□□□ 0.68
YTHDF3-208ENST00000615676 TRIM52Q96A61 297 aa19.28■□□□□ 0.68
YTHDF3-208ENST00000615676 DIEXFQ68CQ4 756 aaKnown RBP19.22■□□□□ 0.67
YTHDF3-208ENST00000615676 ZBTB47Q9UFB7 747 aaPredicted RBP19.14■□□□□ 0.65
YTHDF3-208ENST00000615676 NEUROD1Q13562 356 aa19.09■□□□□ 0.65
YTHDF3-208ENST00000615676 ANP32CO43423 234 aa19.06■□□□□ 0.64
YTHDF3-208ENST00000615676 PABPN1Q86U42 306 aaKnown RBP eCLIP19.03■□□□□ 0.64
YTHDF3-208ENST00000615676 ZNF326Q5BKZ1 582 aaKnown RBP19.02■□□□□ 0.64
YTHDF3-208ENST00000615676 NEFMP07197 916 aa18.99■□□□□ 0.63
YTHDF3-208ENST00000615676 FBLN2P98095 1184 aa18.97■□□□□ 0.63
YTHDF3-208ENST00000615676 ABCC9O60706 1549 aa18.95■□□□□ 0.62
YTHDF3-208ENST00000615676 CDK11AQ9UQ88 783 aaPredicted RBP18.93■□□□□ 0.62
YTHDF3-208ENST00000615676 CANXP27824 592 aaKnown RBP18.91■□□□□ 0.62
YTHDF3-208ENST00000615676 BCANQ96GW7 911 aa18.85■□□□□ 0.61
YTHDF3-208ENST00000615676 SLC24A1O60721 1099 aa18.85■□□□□ 0.61
YTHDF3-208ENST00000615676 GTF3C3Q9Y5Q9 886 aa18.73■□□□□ 0.59
YTHDF3-208ENST00000615676 CSRNP3Q8WYN3 585 aa18.71■□□□□ 0.59
YTHDF3-208ENST00000615676 ESF1Q9H501 851 aaKnown RBP18.71■□□□□ 0.59
YTHDF3-208ENST00000615676 ZNF777Q9ULD5 760 aaPredicted RBP18.68■□□□□ 0.58
YTHDF3-208ENST00000615676 P3H3Q8IVL6 736 aa18.68■□□□□ 0.58
YTHDF3-208ENST00000615676 BCL11AQ9H165 835 aa18.67■□□□□ 0.58
YTHDF3-208ENST00000615676 ANP32AP39687 249 aaKnown RBP18.66■□□□□ 0.58
YTHDF3-208ENST00000615676 ARID3CA6NKF2 412 aa18.64■□□□□ 0.57
YTHDF3-208ENST00000615676 STAG3Q9UJ98 1225 aa18.57■□□□□ 0.56
YTHDF3-208ENST00000615676 NPM1P06748 294 aaKnown RBP eCLIP18.54■□□□□ 0.56
YTHDF3-208ENST00000615676 TONSLQ96HA7 1378 aa18.53■□□□□ 0.56
YTHDF3-208ENST00000615676 ANP32BQ92688 251 aaKnown RBP18.52■□□□□ 0.56
YTHDF3-208ENST00000615676 CHGAP10645 457 aaKnown RBP18.5■□□□□ 0.55
YTHDF3-208ENST00000615676 UPF2Q9HAU5 1272 aaKnown RBP18.49■□□□□ 0.55
YTHDF3-208ENST00000615676 HSP90AA1P07900 732 aaKnown RBP18.47■□□□□ 0.55
YTHDF3-208ENST00000615676 ACIN1Q9UKV3 1341 aaKnown RBP18.45■□□□□ 0.54
YTHDF3-208ENST00000615676 NPM2Q86SE8 214 aaKnown RBP18.44■□□□□ 0.54
YTHDF3-208ENST00000615676 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.38■□□□□ 0.53
YTHDF3-208ENST00000615676 HNRNPUQ00839 825 aaKnown RBP eCLIP18.36■□□□□ 0.53
YTHDF3-208ENST00000615676 FKBP8Q14318 412 aa18.32■□□□□ 0.52
YTHDF3-208ENST00000615676 TSPY4P0CV99 314 aa18.32■□□□□ 0.52
YTHDF3-208ENST00000615676 TSPY10P0CW01 314 aa18.32■□□□□ 0.52
YTHDF3-208ENST00000615676 TMC1Q8TDI8 760 aa18.31■□□□□ 0.52
YTHDF3-208ENST00000615676 FAM9BQ8IZU0 186 aa18.31■□□□□ 0.52
YTHDF3-208ENST00000615676 WDR43Q15061 677 aaKnown RBP eCLIP18.29■□□□□ 0.52
YTHDF3-208ENST00000615676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.27■□□□□ 0.522e-7■■□□□ 13.3
YTHDF3-208ENST00000615676 DDX10Q13206 875 aaKnown RBP18.27■□□□□ 0.51
YTHDF3-208ENST00000615676 PLPPR3Q6T4P5 718 aa18.27■□□□□ 0.51
YTHDF3-208ENST00000615676 SCRIBQ14160 1630 aa18.26■□□□□ 0.51
YTHDF3-208ENST00000615676 CHIC2Q9UKJ5 165 aa18.23■□□□□ 0.51
YTHDF3-208ENST00000615676 CCDC136Q96JN2 1154 aa18.23■□□□□ 0.51
YTHDF3-208ENST00000615676 SALL2Q9Y467 1007 aaPredicted RBP18.19■□□□□ 0.5
YTHDF3-208ENST00000615676 MTUS2Q5JR59 1369 aa18.19■□□□□ 0.5
YTHDF3-208ENST00000615676 MYH16Q9H6N6 1097 aa18.18■□□□□ 0.5
YTHDF3-208ENST00000615676 MRS2Q9HD23 443 aa18.16■□□□□ 0.5
YTHDF3-208ENST00000615676 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
YTHDF3-208ENST00000615676 KDM2AQ9Y2K7 1162 aa18.14■□□□□ 0.49
YTHDF3-208ENST00000615676 DCAF1Q9Y4B6 1507 aa18.12■□□□□ 0.49
YTHDF3-208ENST00000615676 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
YTHDF3-208ENST00000615676 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
YTHDF3-208ENST00000615676 EIF4G2P78344 907 aaKnown RBP eCLIP18.07■□□□□ 0.482e-6■■■□□ 17.4
YTHDF3-208ENST00000615676 CDK11BP21127 795 aaKnown RBP18.06■□□□□ 0.48
YTHDF3-208ENST00000615676 GLIPR1L2Q4G1C9 344 aa18.06■□□□□ 0.48
YTHDF3-208ENST00000615676 PPP1R15AO75807 674 aaPredicted RBP18.06■□□□□ 0.48
YTHDF3-208ENST00000615676 RSF1Q96T23 1441 aaPredicted RBP18.02■□□□□ 0.48
YTHDF3-208ENST00000615676 PLEKHD1A6NEE1 506 aa18■□□□□ 0.47
YTHDF3-208ENST00000615676 CLIP1P30622 1438 aa18■□□□□ 0.47
YTHDF3-208ENST00000615676 A0A0G2JS52 829 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms