Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 AKR1C3-209ENST00000605149 1405 ntTSL 2 BASIC12.79□□□□□ -0.369e-7■■■■□ 22
U2AF2P26368 AKR1C3-202ENST00000439082 972 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.659e-7■■■■□ 22
U2AF2P26368 AKR1C3-201ENST00000380554 1807 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.669e-7■■■■□ 22
U2AF2P26368 RHOBTB3-208ENST00000507186 492 ntTSL 33.39□□□□□ -1.873e-17■■■■□ 21.9
U2AF2P26368 CWC22-202ENST00000410053 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.083e-8■■■■□ 21.9
U2AF2P26368 CWC22-201ENST00000404136 2392 ntTSL 1 (best)4.7□□□□□ -1.663e-8■■■■□ 21.9
U2AF2P26368 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC14.44□□□□□ -0.12e-6■■■■□ 21.9
U2AF2P26368 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.569e-7■■■■□ 21.9
U2AF2P26368 HMBS-212ENST00000542044 1544 ntTSL 522.36■■□□□ 1.179e-7■■■■□ 21.9
U2AF2P26368 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.18■■□□□ 1.149e-7■■■■□ 21.9
U2AF2P26368 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.23■□□□□ 0.999e-7■■■■□ 21.9
U2AF2P26368 HMBS-226ENST00000640813 1283 ntTSL 520.88■□□□□ 0.939e-7■■■■□ 21.9
U2AF2P26368 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.12■□□□□ 0.819e-7■■■■□ 21.9
U2AF2P26368 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.96■□□□□ 0.639e-7■■■■□ 21.9
U2AF2P26368 HMBS-224ENST00000546226 2112 ntTSL 217.87■□□□□ 0.459e-7■■■■□ 21.9
U2AF2P26368 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.35■□□□□ 0.059e-7■■■■□ 21.9
U2AF2P26368 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC14.49□□□□□ -0.099e-7■■■■□ 21.9
U2AF2P26368 HMBS-217ENST00000543543 1796 ntTSL 512.71□□□□□ -0.389e-7■■■■□ 21.9
U2AF2P26368 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.198e-7■■■■□ 21.9
U2AF2P26368 ZFC3H1-212ENST00000552994 7597 ntTSL 1 (best)13.61□□□□□ -0.238e-7■■■■□ 21.9
U2AF2P26368 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.473e-8■■■■□ 21.9
U2AF2P26368 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.99■■□□□ 1.113e-8■■■■□ 21.9
U2AF2P26368 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.85■■□□□ 1.093e-8■■■■□ 21.9
U2AF2P26368 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.3■□□□□ 0.683e-8■■■■□ 21.9
U2AF2P26368 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.413e-8■■■■□ 21.9
U2AF2P26368 FIP1L1-212ENST00000513975 1464 ntTSL 216.27■□□□□ 0.193e-8■■■■□ 21.9
U2AF2P26368 FIP1L1-205ENST00000505125 3180 ntTSL 1 (best)16.24■□□□□ 0.193e-8■■■■□ 21.9
U2AF2P26368 FIP1L1-213ENST00000514543 1465 ntTSL 55.64□□□□□ -1.513e-8■■■■□ 21.9
U2AF2P26368 UVSSA-204ENST00000505716 549 ntTSL 312.02□□□□□ -0.493e-7■■■■□ 21.9
U2AF2P26368 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.07■■□□□ 1.121e-9■■■■□ 21.9
U2AF2P26368 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.021e-9■■■■□ 21.9
U2AF2P26368 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.13■□□□□ 0.971e-9■■■■□ 21.9
U2AF2P26368 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.921e-9■■■■□ 21.9
U2AF2P26368 IFFO1-203ENST00000396830 1776 ntTSL 1 (best)20.7■□□□□ 0.91e-9■■■■□ 21.9
U2AF2P26368 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.37■□□□□ 0.851e-9■■■■□ 21.9
U2AF2P26368 IFFO1-209ENST00000487279 2786 ntTSL 1 (best)20■□□□□ 0.791e-9■■■■□ 21.9
U2AF2P26368 IFFO1-210ENST00000488007 3001 ntTSL 517.65■□□□□ 0.421e-9■■■■□ 21.9
U2AF2P26368 IFFO1-208ENST00000472558 2571 ntTSL 216.91■□□□□ 0.31e-9■■■■□ 21.9
U2AF2P26368 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC15.54■□□□□ 0.081e-9■■■■□ 21.9
U2AF2P26368 IFFO1-207ENST00000471408 2843 ntTSL 215.11■□□□□ 0.011e-9■■■■□ 21.9
U2AF2P26368 IFFO1-205ENST00000436152 3101 ntTSL 2 BASIC13.34□□□□□ -0.271e-9■■■■□ 21.9
U2AF2P26368 PAXBP1-207ENST00000466846 3879 ntTSL 24.12□□□□□ -1.752e-8■■■■□ 21.9
U2AF2P26368 ELF2-209ENST00000511184 1766 ntTSL 531.92■■■□□ 2.71e-7■■■■□ 21.9
U2AF2P26368 UBR4-217ENST00000497018 183 ntTSL 31.77□□□□□ -2.133e-9■■■■□ 21.9
U2AF2P26368 TMEM39A-203ENST00000461654 588 ntTSL 417.4■□□□□ 0.381e-9■■■■□ 21.9
U2AF2P26368 TMEM39A-207ENST00000482162 554 ntTSL 510.84□□□□□ -0.671e-9■■■■□ 21.9
U2AF2P26368 TMEM39A-212ENST00000497993 590 ntTSL 36.34□□□□□ -1.391e-9■■■■□ 21.9
U2AF2P26368 DCAF1-202ENST00000423656 5946 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.652e-8■■■■□ 21.9
U2AF2P26368 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC10.95□□□□□ -0.662e-8■■■■□ 21.9
U2AF2P26368 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.862e-8■■■■□ 21.9
U2AF2P26368 USP53-201ENST00000274030 5936 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.352e-7■■■■□ 21.9
U2AF2P26368 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.59■■□□□ 1.692e-7■■■■□ 21.9
U2AF2P26368 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6□□□□□ -1.455e-7■■■■□ 21.9
U2AF2P26368 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.595e-7■■■■□ 21.9
U2AF2P26368 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.04□□□□□ -1.65e-7■■■■□ 21.9
U2AF2P26368 WDR43-201ENST00000296126 787 ntTSL 53.34□□□□□ -1.873e-7■■■■□ 21.9
U2AF2P26368 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.43■□□□□ 0.223e-8■■■■□ 21.9
U2AF2P26368 AKR1C2-204ENST00000460124 2639 ntTSL 58.49□□□□□ -1.053e-8■■■■□ 21.9
U2AF2P26368 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.083e-8■■■■□ 21.9
U2AF2P26368 AKR1C2-209ENST00000604507 745 ntTSL 55.87□□□□□ -1.473e-8■■■■□ 21.9
U2AF2P26368 HSDL1-208ENST00000619773 3059 nt10.29□□□□□ -0.761e-9■■■■□ 21.9
U2AF2P26368 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.223e-7■■■■□ 21.9
U2AF2P26368 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC9.15□□□□□ -0.942e-8■■■■□ 21.9
U2AF2P26368 CCAR1-207ENST00000536012 2447 ntTSL 1 (best)8.95□□□□□ -0.982e-8■■■■□ 21.9
U2AF2P26368 CCAR1-214ENST00000543225 2407 ntTSL 1 (best)8.24□□□□□ -1.092e-8■■■■□ 21.9
U2AF2P26368 CCAR1-215ENST00000543229 2475 ntTSL 27.68□□□□□ -1.182e-8■■■■□ 21.9
U2AF2P26368 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.232e-8■■■■□ 21.9
U2AF2P26368 CCAR1-213ENST00000541012 2432 ntTSL 1 (best)7.2□□□□□ -1.262e-8■■■■□ 21.9
U2AF2P26368 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.89□□□□□ -1.312e-8■■■■□ 21.9
U2AF2P26368 CCAR1-211ENST00000539539 3224 ntTSL 25.08□□□□□ -1.62e-8■■■■□ 21.9
U2AF2P26368 CCAR1-212ENST00000540210 3415 ntTSL 1 (best)4.36□□□□□ -1.712e-8■■■■□ 21.9
U2AF2P26368 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.191e-8■■■■□ 21.9
U2AF2P26368 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.251e-8■■■■□ 21.9
U2AF2P26368 DCAF6-205ENST00000450548 724 ntTSL 320.44■□□□□ 0.862e-8■■■■□ 21.9
U2AF2P26368 DCAF6-209ENST00000470919 827 ntTSL 22.71□□□□□ -1.982e-8■■■■□ 21.9
U2AF2P26368 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC14.58□□□□□ -0.082e-13■■■■□ 21.9
U2AF2P26368 HSPA8-215ENST00000532091 2301 ntTSL 513.68□□□□□ -0.222e-13■■■■□ 21.9
U2AF2P26368 USP25-206ENST00000453553 611 ntTSL 33.45□□□□□ -1.863e-6■■■■□ 21.9
U2AF2P26368 FLNB-206ENST00000468939 573 ntTSL 214.24□□□□□ -0.139e-8■■■■□ 21.9
U2AF2P26368 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.67■■□□□ 1.864e-7■■■■□ 21.8
U2AF2P26368 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.544e-7■■■■□ 21.8
U2AF2P26368 RNPEP-212ENST00000492587 780 ntTSL 524.65■■□□□ 1.544e-7■■■■□ 21.8
U2AF2P26368 RNPEP-209ENST00000479726 822 ntTSL 517.14■□□□□ 0.334e-7■■■■□ 21.8
U2AF2P26368 RNPEP-203ENST00000447312 1166 ntTSL 514.45□□□□□ -0.14e-7■■■■□ 21.8
U2AF2P26368 RNPEP-206ENST00000471105 2093 ntTSL 1 (best)13.88□□□□□ -0.194e-7■■■■□ 21.8
U2AF2P26368 RNPEP-213ENST00000492849 958 ntTSL 513□□□□□ -0.334e-7■■■■□ 21.8
U2AF2P26368 RNPEP-207ENST00000478617 1069 ntTSL 512.45□□□□□ -0.424e-7■■■■□ 21.8
U2AF2P26368 RNPEP-210ENST00000481780 847 ntTSL 511.88□□□□□ -0.514e-7■■■■□ 21.8
U2AF2P26368 RNPEP-211ENST00000487116 851 ntTSL 310.83□□□□□ -0.684e-7■■■■□ 21.8
U2AF2P26368 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.264e-7■■■■□ 21.8
U2AF2P26368 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.274e-7■■■■□ 21.8
U2AF2P26368 MLLT6-202ENST00000612066 527 ntTSL 214.65□□□□□ -0.063e-11■■■■□ 21.8
U2AF2P26368 MLLT6-206ENST00000615858 1208 ntTSL 413.14□□□□□ -0.313e-11■■■■□ 21.8
U2AF2P26368 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.67■□□□□ 0.266e-7■■■■□ 21.8
U2AF2P26368 ZNF100-206ENST00000608416 1840 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.316e-7■■■■□ 21.8
U2AF2P26368 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC9.46□□□□□ -0.896e-7■■■■□ 21.8
U2AF2P26368 ZNF100-203ENST00000594401 548 ntTSL 46.97□□□□□ -1.296e-7■■■■□ 21.8
U2AF2P26368 RSPRY1-210ENST00000566352 1241 ntTSL 1 (best)19.86■□□□□ 0.772e-6■■■■□ 21.8
U2AF2P26368 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.41e-7■■■■□ 21.8
U2AF2P26368 PRPF3-202ENST00000467329 2595 ntTSL 510.93□□□□□ -0.661e-7■■■■□ 21.8
Retrieved 100 of 36,523 protein–RNA pairs in 212.7 ms