RNA–Protein interactions for RNA: ENST00000420886.6

SBNO1-202, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SBNO1, Length 10,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-202ENST00000420886 PELP1Q8IZL8 1130 aaKnown RBP11.07□□□□□ -0.64
SBNO1-202ENST00000420886 MYT1Q01538 1121 aa11.07□□□□□ -0.64
SBNO1-202ENST00000420886 TTBK1Q5TCY1 1321 aaPredicted RBP10.29□□□□□ -0.76
SBNO1-202ENST00000420886 CENPBP07199 599 aaPredicted RBP10.24□□□□□ -0.77
SBNO1-202ENST00000420886 ZEB1P37275 1124 aaPredicted RBP10.18□□□□□ -0.78
SBNO1-202ENST00000420886 PCGF6Q9BYE7 350 aa10.1□□□□□ -0.79
SBNO1-202ENST00000420886 HRCP23327 699 aa10.1□□□□□ -0.79
SBNO1-202ENST00000420886 NISCHQ9Y2I1 1504 aa10.05□□□□□ -0.8
SBNO1-202ENST00000420886 ERICH6Q7L0X2 663 aa9.99□□□□□ -0.81
SBNO1-202ENST00000420886 CCER1Q8TC90 406 aaPredicted RBP9.99□□□□□ -0.81
SBNO1-202ENST00000420886 SUPT5HO00267 1087 aaKnown RBP9.91□□□□□ -0.82
SBNO1-202ENST00000420886 TRIM26Q12899 539 aaPredicted RBP9.73□□□□□ -0.85
SBNO1-202ENST00000420886 YTHDC1Q96MU7 727 aaKnown RBP9.71□□□□□ -0.86
SBNO1-202ENST00000420886 NEFLP07196 543 aa9.68□□□□□ -0.86
SBNO1-202ENST00000420886 PPARGC1BQ86YN6 1023 aaKnown RBP9.65□□□□□ -0.86
SBNO1-202ENST00000420886 SHROOM4Q9ULL8 1493 aa9.62□□□□□ -0.87
SBNO1-202ENST00000420886 GTF3C3Q9Y5Q9 886 aa9.62□□□□□ -0.87
SBNO1-202ENST00000420886 ACIN1Q9UKV3 1341 aaKnown RBP9.57□□□□□ -0.88
SBNO1-202ENST00000420886 DCAF8L2P0C7V8 631 aa9.53□□□□□ -0.88
SBNO1-202ENST00000420886 DIEXFQ68CQ4 756 aaKnown RBP9.53□□□□□ -0.88
SBNO1-202ENST00000420886 CLSPNQ9HAW4 1339 aa9.51□□□□□ -0.89
SBNO1-202ENST00000420886 SCAF1Q9H7N4 1312 aaKnown RBP9.5□□□□□ -0.89
SBNO1-202ENST00000420886 MYT1LQ9UL68 1186 aa9.49□□□□□ -0.89
SBNO1-202ENST00000420886 RTL5Q5HYW3 569 aaPredicted RBP9.47□□□□□ -0.89
SBNO1-202ENST00000420886 APLP2Q06481 763 aa9.43□□□□□ -0.9
SBNO1-202ENST00000420886 GLIPR1L2Q4G1C9 344 aa9.41□□□□□ -0.9
SBNO1-202ENST00000420886 CCDC180Q9P1Z9 1646 aa9.4□□□□□ -0.9
SBNO1-202ENST00000420886 BCL11AQ9H165 835 aa9.39□□□□□ -0.91
SBNO1-202ENST00000420886 EHMT2Q96KQ7 1210 aa9.36□□□□□ -0.91
SBNO1-202ENST00000420886 DAXXQ9UER7 740 aaPredicted RBP9.34□□□□□ -0.91
SBNO1-202ENST00000420886 DCAF1Q9Y4B6 1507 aa9.34□□□□□ -0.91
SBNO1-202ENST00000420886 ANP32EQ9BTT0 268 aa9.32□□□□□ -0.92
SBNO1-202ENST00000420886 NEUROD1Q13562 356 aa9.27□□□□□ -0.93
SBNO1-202ENST00000420886 TRIM41Q8WV44 630 aa9.25□□□□□ -0.93
SBNO1-202ENST00000420886 CDK11AQ9UQ88 783 aaPredicted RBP9.25□□□□□ -0.93
SBNO1-202ENST00000420886 FAM9AQ8IZU1 332 aaPredicted RBP9.24□□□□□ -0.93
SBNO1-202ENST00000420886 CHIC1Q5VXU3 224 aa9.22□□□□□ -0.93
SBNO1-202ENST00000420886 EIF5BO60841 1220 aaKnown RBP9.21□□□□□ -0.93
SBNO1-202ENST00000420886 ZNF316A6NFI3 1004 aaPredicted RBP9.19□□□□□ -0.94
SBNO1-202ENST00000420886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.18□□□□□ -0.94
SBNO1-202ENST00000420886 LOC105371045A0A1W2PR82 267 aa9.15□□□□□ -0.95
SBNO1-202ENST00000420886 ANP32AP39687 249 aaKnown RBP9.13□□□□□ -0.95
SBNO1-202ENST00000420886 BCANQ96GW7 911 aa9.11□□□□□ -0.95
SBNO1-202ENST00000420886 UBTFP17480 764 aaKnown RBP8.99□□□□□ -0.97
SBNO1-202ENST00000420886 FKBP8Q14318 412 aa8.99□□□□□ -0.97
SBNO1-202ENST00000420886 NBR1Q14596 966 aa8.99□□□□□ -0.97
SBNO1-202ENST00000420886 ERICH6BQ5W0A0 696 aa8.99□□□□□ -0.97
SBNO1-202ENST00000420886 PRKCSHP14314 528 aaPredicted RBP8.98□□□□□ -0.97
SBNO1-202ENST00000420886 ANP32CO43423 234 aa8.95□□□□□ -0.98
SBNO1-202ENST00000420886 ZBTB47Q9UFB7 747 aaPredicted RBP8.94□□□□□ -0.98
SBNO1-202ENST00000420886 CSRNP3Q8WYN3 585 aa8.93□□□□□ -0.98
SBNO1-202ENST00000420886 HNRNPUL2Q1KMD3 747 aaKnown RBP8.9□□□□□ -0.98
SBNO1-202ENST00000420886 MYO15BQ96JP2 1530 aa8.9□□□□□ -0.98
SBNO1-202ENST00000420886 DEKP35659 375 aaKnown RBP8.9□□□□□ -0.99
SBNO1-202ENST00000420886 SUPT16HQ9Y5B9 1047 aaKnown RBP8.89□□□□□ -0.99
SBNO1-202ENST00000420886 ANP32BQ92688 251 aaKnown RBP8.87□□□□□ -0.99
SBNO1-202ENST00000420886 RANGAP1P46060 587 aaPredicted RBP8.86□□□□□ -0.99
SBNO1-202ENST00000420886 MIER1Q8N108 512 aa8.86□□□□□ -0.99
SBNO1-202ENST00000420886 TNNT2P45379 298 aaPredicted RBP8.85□□□□□ -0.99
SBNO1-202ENST00000420886 SLC24A1O60721 1099 aa8.84□□□□□ -0.99
SBNO1-202ENST00000420886 NOP58Q9Y2X3 529 aaKnown RBP8.82□□□□□ -1
SBNO1-202ENST00000420886 NCLP19338 710 aaKnown RBP8.81□□□□□ -1
SBNO1-202ENST00000420886 RBM19Q9Y4C8 960 aaKnown RBP8.8□□□□□ -1
SBNO1-202ENST00000420886 NPM2Q86SE8 214 aaKnown RBP8.8□□□□□ -1
SBNO1-202ENST00000420886 NEFMP07197 916 aa8.8□□□□□ -1
SBNO1-202ENST00000420886 RTN4Q9NQC3 1192 aaKnown RBP8.8□□□□□ -1
SBNO1-202ENST00000420886 DDRGK1Q96HY6 314 aa8.78□□□□□ -1
SBNO1-202ENST00000420886 ITGAEP38570 1179 aa8.78□□□□□ -1
SBNO1-202ENST00000420886 TSHZ2Q9NRE2 1034 aa8.77□□□□□ -1.01
SBNO1-202ENST00000420886 PPM1GO15355 546 aaPredicted RBP8.77□□□□□ -1.01
SBNO1-202ENST00000420886 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.75□□□□□ -1.01
SBNO1-202ENST00000420886 RSPH6AQ9H0K4 717 aa8.75□□□□□ -1.01
SBNO1-202ENST00000420886 NAP1L5Q96NT1 182 aaPredicted RBP8.73□□□□□ -1.01
SBNO1-202ENST00000420886 TRIM44Q96DX7 344 aaPredicted RBP8.73□□□□□ -1.01
SBNO1-202ENST00000420886 CCDC136Q96JN2 1154 aa8.72□□□□□ -1.01
SBNO1-202ENST00000420886 HSP90AA1P07900 732 aaKnown RBP8.71□□□□□ -1.02
SBNO1-202ENST00000420886 HNRNPUQ00839 825 aaKnown RBP eCLIP8.7□□□□□ -1.02
SBNO1-202ENST00000420886 PKNOX2Q96KN3 472 aa8.7□□□□□ -1.02
SBNO1-202ENST00000420886 CDK11BP21127 795 aaKnown RBP8.7□□□□□ -1.02
SBNO1-202ENST00000420886 UPF2Q9HAU5 1272 aaKnown RBP8.69□□□□□ -1.02
SBNO1-202ENST00000420886 TRIM52Q96A61 297 aa8.67□□□□□ -1.02
SBNO1-202ENST00000420886 ATP1B4Q9UN42 357 aaPredicted RBP8.65□□□□□ -1.02
SBNO1-202ENST00000420886 USP35Q9P2H5 1018 aa8.65□□□□□ -1.03
SBNO1-202ENST00000420886 FANCIQ9NVI1 1328 aa8.65□□□□□ -1.03
SBNO1-202ENST00000420886 PPP4R2Q9NY27 417 aa8.64□□□□□ -1.03
SBNO1-202ENST00000420886 POLR3GLQ9BT43 218 aa8.64□□□□□ -1.03
SBNO1-202ENST00000420886 HSP90AA2PQ14568 343 aaPredicted RBP8.64□□□□□ -1.03
SBNO1-202ENST00000420886 PODXL2Q9NZ53 605 aa8.64□□□□□ -1.03
SBNO1-202ENST00000420886 L1TD1Q5T7N2 865 aaKnown RBP8.63□□□□□ -1.03
SBNO1-202ENST00000420886 BECN1Q14457 450 aa8.63□□□□□ -1.03
SBNO1-202ENST00000420886 UBE2Q2Q8WVN8 375 aa8.61□□□□□ -1.03
SBNO1-202ENST00000420886 DDX10Q13206 875 aaKnown RBP8.6□□□□□ -1.03
SBNO1-202ENST00000420886 VSIG10Q8N0Z9 540 aa8.59□□□□□ -1.03
SBNO1-202ENST00000420886 ANO8Q9HCE9 1232 aaPredicted RBP8.59□□□□□ -1.04
SBNO1-202ENST00000420886 ARXQ96QS3 562 aa8.58□□□□□ -1.04
SBNO1-202ENST00000420886 ZNF326Q5BKZ1 582 aaKnown RBP8.58□□□□□ -1.04
SBNO1-202ENST00000420886 LAS1LQ9Y4W2 734 aaKnown RBP8.57□□□□□ -1.04
SBNO1-202ENST00000420886 IRX6P78412 446 aaPredicted RBP8.57□□□□□ -1.04
SBNO1-202ENST00000420886 PNNQ9H307 717 aaKnown RBP8.56□□□□□ -1.04
SBNO1-202ENST00000420886 IPO9Q96P70 1041 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms