RNA–Protein interactions for RNA: ENST00000267176.8

SBNO1-201, Transcript of strawberry notch homolog 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SBNO1, Length 11,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-201ENST00000267176 DCAF8L2P0C7V8 631 aa10.65□□□□□ -0.7
SBNO1-201ENST00000267176 SUPT5HO00267 1087 aaKnown RBP10.38□□□□□ -0.75
SBNO1-201ENST00000267176 MYT1Q01538 1121 aa10.18□□□□□ -0.78
SBNO1-201ENST00000267176 NISCHQ9Y2I1 1504 aa10.18□□□□□ -0.78
SBNO1-201ENST00000267176 SHROOM4Q9ULL8 1493 aa10.14□□□□□ -0.79
SBNO1-201ENST00000267176 PELP1Q8IZL8 1130 aaKnown RBP10.1□□□□□ -0.79
SBNO1-201ENST00000267176 EHMT2Q96KQ7 1210 aa10.09□□□□□ -0.79
SBNO1-201ENST00000267176 PCGF6Q9BYE7 350 aa9.99□□□□□ -0.81
SBNO1-201ENST00000267176 CENPBP07199 599 aaPredicted RBP9.8□□□□□ -0.84
SBNO1-201ENST00000267176 TTBK1Q5TCY1 1321 aaPredicted RBP9.79□□□□□ -0.84
SBNO1-201ENST00000267176 FAM9AQ8IZU1 332 aaPredicted RBP9.79□□□□□ -0.84
SBNO1-201ENST00000267176 APLP2Q06481 763 aa9.78□□□□□ -0.84
SBNO1-201ENST00000267176 ZEB1P37275 1124 aaPredicted RBP9.72□□□□□ -0.85
SBNO1-201ENST00000267176 CCER1Q8TC90 406 aaPredicted RBP9.72□□□□□ -0.85
SBNO1-201ENST00000267176 ERICH6Q7L0X2 663 aa9.72□□□□□ -0.85
SBNO1-201ENST00000267176 YTHDC1Q96MU7 727 aaKnown RBP9.62□□□□□ -0.87
SBNO1-201ENST00000267176 TRIM41Q8WV44 630 aa9.57□□□□□ -0.88
SBNO1-201ENST00000267176 RANGAP1P46060 587 aaPredicted RBP9.54□□□□□ -0.88
SBNO1-201ENST00000267176 HRCP23327 699 aa9.51□□□□□ -0.89
SBNO1-201ENST00000267176 NEFLP07196 543 aa9.49□□□□□ -0.89
SBNO1-201ENST00000267176 TRIM26Q12899 539 aaPredicted RBP9.48□□□□□ -0.89
SBNO1-201ENST00000267176 PPARGC1BQ86YN6 1023 aaKnown RBP9.48□□□□□ -0.89
SBNO1-201ENST00000267176 UBTFP17480 764 aaKnown RBP9.43□□□□□ -0.9
SBNO1-201ENST00000267176 ATP1B4Q9UN42 357 aaPredicted RBP9.41□□□□□ -0.9
SBNO1-201ENST00000267176 LOC105371045A0A1W2PR82 267 aa9.33□□□□□ -0.92
SBNO1-201ENST00000267176 DIEXFQ68CQ4 756 aaKnown RBP9.26□□□□□ -0.93
SBNO1-201ENST00000267176 DAXXQ9UER7 740 aaPredicted RBP9.23□□□□□ -0.93
SBNO1-201ENST00000267176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.22□□□□□ -0.93
SBNO1-201ENST00000267176 CHIC1Q5VXU3 224 aa9.21□□□□□ -0.93
SBNO1-201ENST00000267176 ITGAEP38570 1179 aa9.21□□□□□ -0.94
SBNO1-201ENST00000267176 GTF3C3Q9Y5Q9 886 aa9.18□□□□□ -0.94
SBNO1-201ENST00000267176 HNRNPUL2Q1KMD3 747 aaKnown RBP9.18□□□□□ -0.94
SBNO1-201ENST00000267176 CNGB1Q14028 1251 aaPredicted RBP9.14□□□□□ -0.95
SBNO1-201ENST00000267176 POLR3GLQ9BT43 218 aa9.13□□□□□ -0.95
SBNO1-201ENST00000267176 RTL5Q5HYW3 569 aaPredicted RBP9.11□□□□□ -0.95
SBNO1-201ENST00000267176 BCANQ96GW7 911 aa9.05□□□□□ -0.96
SBNO1-201ENST00000267176 ZNF316A6NFI3 1004 aaPredicted RBP9.03□□□□□ -0.96
SBNO1-201ENST00000267176 CLSPNQ9HAW4 1339 aa8.99□□□□□ -0.97
SBNO1-201ENST00000267176 ACIN1Q9UKV3 1341 aaKnown RBP8.99□□□□□ -0.97
SBNO1-201ENST00000267176 CDK11AQ9UQ88 783 aaPredicted RBP8.96□□□□□ -0.98
SBNO1-201ENST00000267176 NEUROD1Q13562 356 aa8.94□□□□□ -0.98
SBNO1-201ENST00000267176 FAM50AQ14320 339 aaKnown RBP8.92□□□□□ -0.98
SBNO1-201ENST00000267176 ANP32CO43423 234 aa8.91□□□□□ -0.98
SBNO1-201ENST00000267176 MYT1LQ9UL68 1186 aa8.9□□□□□ -0.98
SBNO1-201ENST00000267176 SLC4A1APQ9BWU0 796 aaKnown RBP8.89□□□□□ -0.99
SBNO1-201ENST00000267176 TRIM52Q96A61 297 aa8.84□□□□□ -0.99
SBNO1-201ENST00000267176 ANP32AP39687 249 aaKnown RBP8.82□□□□□ -1
SBNO1-201ENST00000267176 SCAF1Q9H7N4 1312 aaKnown RBP8.81□□□□□ -1
SBNO1-201ENST00000267176 FKBP8Q14318 412 aa8.81□□□□□ -1
SBNO1-201ENST00000267176 EIF5BO60841 1220 aaKnown RBP8.8□□□□□ -1
SBNO1-201ENST00000267176 ZNF326Q5BKZ1 582 aaKnown RBP8.78□□□□□ -1
SBNO1-201ENST00000267176 NPM2Q86SE8 214 aaKnown RBP8.76□□□□□ -1.01
SBNO1-201ENST00000267176 BCL11AQ9H165 835 aa8.74□□□□□ -1.01
SBNO1-201ENST00000267176 DCAF1Q9Y4B6 1507 aa8.74□□□□□ -1.01
SBNO1-201ENST00000267176 SLC24A1O60721 1099 aa8.73□□□□□ -1.01
SBNO1-201ENST00000267176 NBR1Q14596 966 aa8.72□□□□□ -1.01
SBNO1-201ENST00000267176 HNRNPUQ00839 825 aaKnown RBP eCLIP8.7□□□□□ -1.02
SBNO1-201ENST00000267176 CANXP27824 592 aaKnown RBP8.7□□□□□ -1.02
SBNO1-201ENST00000267176 ZBTB47Q9UFB7 747 aaPredicted RBP8.69□□□□□ -1.02
SBNO1-201ENST00000267176 DDX10Q13206 875 aaKnown RBP8.67□□□□□ -1.02
SBNO1-201ENST00000267176 FAM9BQ8IZU0 186 aa8.65□□□□□ -1.02
SBNO1-201ENST00000267176 MIER1Q8N108 512 aa8.65□□□□□ -1.03
SBNO1-201ENST00000267176 GLIPR1L2Q4G1C9 344 aa8.64□□□□□ -1.03
SBNO1-201ENST00000267176 ANP32BQ92688 251 aaKnown RBP8.63□□□□□ -1.03
SBNO1-201ENST00000267176 CSRNP3Q8WYN3 585 aa8.63□□□□□ -1.03
SBNO1-201ENST00000267176 P3H3Q8IVL6 736 aa8.62□□□□□ -1.03
SBNO1-201ENST00000267176 SALL2Q9Y467 1007 aaPredicted RBP8.61□□□□□ -1.03
SBNO1-201ENST00000267176 PRKCSHP14314 528 aaPredicted RBP8.61□□□□□ -1.03
SBNO1-201ENST00000267176 TONSLQ96HA7 1378 aa8.61□□□□□ -1.03
SBNO1-201ENST00000267176 HSP90AA1P07900 732 aaKnown RBP8.61□□□□□ -1.03
SBNO1-201ENST00000267176 CCDC136Q96JN2 1154 aa8.61□□□□□ -1.03
SBNO1-201ENST00000267176 ARXQ96QS3 562 aa8.6□□□□□ -1.03
SBNO1-201ENST00000267176 CCDC180Q9P1Z9 1646 aa8.59□□□□□ -1.03
SBNO1-201ENST00000267176 UPF2Q9HAU5 1272 aaKnown RBP8.59□□□□□ -1.03
SBNO1-201ENST00000267176 PABPN1Q86U42 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
SBNO1-201ENST00000267176 IRX6P78412 446 aaPredicted RBP8.59□□□□□ -1.03
SBNO1-201ENST00000267176 MYO15BQ96JP2 1530 aa8.58□□□□□ -1.04
SBNO1-201ENST00000267176 ABCC9O60706 1549 aa8.57□□□□□ -1.04
SBNO1-201ENST00000267176 NEFMP07197 916 aa8.57□□□□□ -1.04
SBNO1-201ENST00000267176 ARID3CA6NKF2 412 aa8.56□□□□□ -1.04
SBNO1-201ENST00000267176 ANP32EQ9BTT0 268 aa8.56□□□□□ -1.04
SBNO1-201ENST00000267176 TMC1Q8TDI8 760 aa8.55□□□□□ -1.04
SBNO1-201ENST00000267176 HIRIP3Q9BW71 556 aaPredicted RBP8.55□□□□□ -1.04
SBNO1-201ENST00000267176 ZNF777Q9ULD5 760 aaPredicted RBP8.52□□□□□ -1.05
SBNO1-201ENST00000267176 FBLN2P98095 1184 aa8.52□□□□□ -1.05
SBNO1-201ENST00000267176 SCRIBQ14160 1630 aa8.51□□□□□ -1.05
SBNO1-201ENST00000267176 MRS2Q9HD23 443 aa8.51□□□□□ -1.05
SBNO1-201ENST00000267176 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.47□□□□□ -1.05
SBNO1-201ENST00000267176 SUPT16HQ9Y5B9 1047 aaKnown RBP8.46□□□□□ -1.05
SBNO1-201ENST00000267176 CHIC2Q9UKJ5 165 aa8.45□□□□□ -1.06
SBNO1-201ENST00000267176 RTN4Q9NQC3 1192 aaKnown RBP8.45□□□□□ -1.06
SBNO1-201ENST00000267176 TRIM44Q96DX7 344 aaPredicted RBP8.44□□□□□ -1.06
SBNO1-201ENST00000267176 ZCCHC6Q5VYS8 1495 aaKnown RBP8.44□□□□□ -1.06
SBNO1-201ENST00000267176 WDR43Q15061 677 aaKnown RBP eCLIP8.43□□□□□ -1.06
SBNO1-201ENST00000267176 EIF4G2P78344 907 aaKnown RBP eCLIP8.42□□□□□ -1.06
SBNO1-201ENST00000267176 DDRGK1Q96HY6 314 aa8.41□□□□□ -1.06
SBNO1-201ENST00000267176 SENP3-EIF4A1A0A087X0R7 540 aa8.41□□□□□ -1.06
SBNO1-201ENST00000267176 KDM2AQ9Y2K7 1162 aa8.4□□□□□ -1.06
SBNO1-201ENST00000267176 BECN1Q14457 450 aa8.39□□□□□ -1.07
SBNO1-201ENST00000267176 CLIP1P30622 1438 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms