RNA–Protein interactions for RNA: ENST00000466846.5

PAXBP1-207, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 3,879 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-207ENST00000466846 CHIC1Q5VXU3 224 aa9.7□□□□□ -0.86
PAXBP1-207ENST00000466846 AEBP2Q6ZN18 517 aaPredicted RBP9.51□□□□□ -0.89
PAXBP1-207ENST00000466846 PHF23Q9BUL5 403 aaPredicted RBP8.48□□□□□ -1.05
PAXBP1-207ENST00000466846 NISCHQ9Y2I1 1504 aa8.34□□□□□ -1.07
PAXBP1-207ENST00000466846 SENP3Q9H4L4 574 aaPredicted RBP8.1□□□□□ -1.11
PAXBP1-207ENST00000466846 PLPPR3Q6T4P5 718 aa7.9□□□□□ -1.14
PAXBP1-207ENST00000466846 CCDC180Q9P1Z9 1646 aa7.41□□□□□ -1.22
PAXBP1-207ENST00000466846 FOXD1Q16676 465 aa7.38□□□□□ -1.23
PAXBP1-207ENST00000466846 DNAJC5BQ9UF47 199 aa7.32□□□□□ -1.24
PAXBP1-207ENST00000466846 PPP6R1Q9UPN7 881 aa7.2□□□□□ -1.26
PAXBP1-207ENST00000466846 ADRA2BP18089 450 aa7.11□□□□□ -1.27
PAXBP1-207ENST00000466846 ZCCHC6Q5VYS8 1495 aaKnown RBP7.09□□□□□ -1.27
PAXBP1-207ENST00000466846 DCAF1Q9Y4B6 1507 aa7.03□□□□□ -1.28
PAXBP1-207ENST00000466846 MYO15BQ96JP2 1530 aa6.92□□□□□ -1.3
PAXBP1-207ENST00000466846 PPP4R3CPQ6ZMV5 832 aa6.91□□□□□ -1.3
PAXBP1-207ENST00000466846 KCNA4P22459 653 aa6.89□□□□□ -1.31
PAXBP1-207ENST00000466846 MSH5O43196 834 aa6.87□□□□□ -1.31
PAXBP1-207ENST00000466846 NCBP3Q53F19 620 aaKnown RBP6.86□□□□□ -1.31
PAXBP1-207ENST00000466846 PIAS4Q8N2W9 510 aaPredicted RBP6.82□□□□□ -1.32
PAXBP1-207ENST00000466846 CNKSR2Q8WXI2 1034 aa6.81□□□□□ -1.32
PAXBP1-207ENST00000466846 UNC13AQ9UPW8 1703 aa6.79□□□□□ -1.32
PAXBP1-207ENST00000466846 SCAF1Q9H7N4 1312 aaKnown RBP6.73□□□□□ -1.33
PAXBP1-207ENST00000466846 NACADO15069 1562 aa6.73□□□□□ -1.33
PAXBP1-207ENST00000466846 NPM3O75607 178 aaKnown RBP6.72□□□□□ -1.33
PAXBP1-207ENST00000466846 RNF216Q9NWF9 866 aaPredicted RBP6.7□□□□□ -1.34
PAXBP1-207ENST00000466846 ABCC9O60706 1549 aa6.7□□□□□ -1.34
PAXBP1-207ENST00000466846 HOXD11P31277 338 aaPredicted RBP6.69□□□□□ -1.34
PAXBP1-207ENST00000466846 CSRNP3Q8WYN3 585 aa6.63□□□□□ -1.35
PAXBP1-207ENST00000466846 SLC4A1APQ9BWU0 796 aaKnown RBP6.62□□□□□ -1.35
PAXBP1-207ENST00000466846 DMRT2Q9Y5R5 561 aa6.62□□□□□ -1.35
PAXBP1-207ENST00000466846 SCRIBQ14160 1630 aa6.6□□□□□ -1.35
PAXBP1-207ENST00000466846 RB1CC1Q8TDY2 1594 aa6.6□□□□□ -1.35
PAXBP1-207ENST00000466846 BICRAQ9NZM4 1560 aa6.58□□□□□ -1.36
PAXBP1-207ENST00000466846 ATXN8OSP0DMR3 200 aa6.54□□□□□ -1.36
PAXBP1-207ENST00000466846 EIF4G1Q04637 1599 aaKnown RBP6.53□□□□□ -1.36
PAXBP1-207ENST00000466846 PEG3Q9GZU2 1588 aa6.49□□□□□ -1.37
PAXBP1-207ENST00000466846 SHROOM4Q9ULL8 1493 aa6.48□□□□□ -1.37
PAXBP1-207ENST00000466846 ZBTB22O15209 634 aa6.47□□□□□ -1.37
PAXBP1-207ENST00000466846 BAZ1AQ9NRL2 1556 aaPredicted RBP6.46□□□□□ -1.37
PAXBP1-207ENST00000466846 SMARCA4P51532 1647 aa6.45□□□□□ -1.38
PAXBP1-207ENST00000466846 FOXD4L1Q9NU39 408 aa6.45□□□□□ -1.38
PAXBP1-207ENST00000466846 RSF1Q96T23 1441 aaPredicted RBP6.44□□□□□ -1.38
PAXBP1-207ENST00000466846 WIZO95785 1651 aa6.44□□□□□ -1.38
PAXBP1-207ENST00000466846 MROH2BQ7Z745 1585 aa6.44□□□□□ -1.38
PAXBP1-207ENST00000466846 CECR2Q9BXF3 1484 aa6.42□□□□□ -1.38
PAXBP1-207ENST00000466846 TOP2AP11388 1531 aaKnown RBP6.35□□□□□ -1.39
PAXBP1-207ENST00000466846 SLC4A2P04920 1241 aa6.34□□□□□ -1.39
PAXBP1-207ENST00000466846 SMARCA2P51531 1590 aa6.33□□□□□ -1.4
PAXBP1-207ENST00000466846 MAPK8IP2Q13387 824 aaPredicted RBP6.33□□□□□ -1.4
PAXBP1-207ENST00000466846 PRDM2Q13029 1718 aa6.32□□□□□ -1.4
PAXBP1-207ENST00000466846 EHMT2Q96KQ7 1210 aa6.29□□□□□ -1.4
PAXBP1-207ENST00000466846 MYCNP04198 464 aaPredicted RBP6.28□□□□□ -1.4
PAXBP1-207ENST00000466846 HMGXB3Q12766 1538 aa6.26□□□□□ -1.41
PAXBP1-207ENST00000466846 ATAD2BQ9ULI0 1458 aa6.22□□□□□ -1.41
PAXBP1-207ENST00000466846 CCDC88BA6NC98 1476 aa6.21□□□□□ -1.42
PAXBP1-207ENST00000466846 DCAF8L2P0C7V8 631 aa6.21□□□□□ -1.42
PAXBP1-207ENST00000466846 BIVM-ERCC5R4GMW8 1640 aa6.19□□□□□ -1.42
PAXBP1-207ENST00000466846 NCAPD3P42695 1498 aa6.17□□□□□ -1.42
PAXBP1-207ENST00000466846 SUPT5HO00267 1087 aaKnown RBP6.16□□□□□ -1.42
PAXBP1-207ENST00000466846 PROM2Q8N271 834 aa6.15□□□□□ -1.43
PAXBP1-207ENST00000466846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.14□□□□□ -1.43
PAXBP1-207ENST00000466846 HNRNPUL2Q1KMD3 747 aaKnown RBP6.14□□□□□ -1.43
PAXBP1-207ENST00000466846 SYNJ1O43426 1573 aa6.13□□□□□ -1.43
PAXBP1-207ENST00000466846 CC2D2AQ9P2K1 1620 aa6.12□□□□□ -1.43
PAXBP1-207ENST00000466846 TOP2BQ02880 1626 aa6.11□□□□□ -1.43
PAXBP1-207ENST00000466846 ABCC8Q09428 1581 aa6.11□□□□□ -1.43
PAXBP1-207ENST00000466846 WDR97A6NE52 1622 aa6.1□□□□□ -1.43
PAXBP1-207ENST00000466846 BAZ1BQ9UIG0 1483 aaKnown RBP6.1□□□□□ -1.43
PAXBP1-207ENST00000466846 SAMD1Q6SPF0 538 aaPredicted RBP6.08□□□□□ -1.44
PAXBP1-207ENST00000466846 CFTRP13569 1480 aa6.06□□□□□ -1.44
PAXBP1-207ENST00000466846 APLP2Q06481 763 aa6.05□□□□□ -1.44
PAXBP1-207ENST00000466846 PABPN1Q86U42 306 aaKnown RBP eCLIP6.04□□□□□ -1.44
PAXBP1-207ENST00000466846 KIF21BO75037 1637 aa6.04□□□□□ -1.44
PAXBP1-207ENST00000466846 CUX1P39880 1505 aa6.03□□□□□ -1.44
PAXBP1-207ENST00000466846 U3KPZ7 1027 aaPredicted RBP6.03□□□□□ -1.44
PAXBP1-207ENST00000466846 KIF21AQ7Z4S6 1674 aa5.99□□□□□ -1.45
PAXBP1-207ENST00000466846 LAMC3Q9Y6N6 1575 aa5.98□□□□□ -1.45
PAXBP1-207ENST00000466846 RUSC2Q8N2Y8 1516 aa5.97□□□□□ -1.45
PAXBP1-207ENST00000466846 WRNQ14191 1432 aaPredicted RBP eCLIP5.96□□□□□ -1.46
PAXBP1-207ENST00000466846 AMER1Q5JTC6 1135 aaPredicted RBP5.95□□□□□ -1.46
PAXBP1-207ENST00000466846 ABCA5Q8WWZ7 1642 aa5.95□□□□□ -1.46
PAXBP1-207ENST00000466846 ERICH3Q5RHP9 1530 aa5.95□□□□□ -1.46
PAXBP1-207ENST00000466846 TARBP1Q13395 1621 aaKnown RBP5.94□□□□□ -1.46
PAXBP1-207ENST00000466846 DNMBPQ6XZF7 1577 aa5.94□□□□□ -1.46
PAXBP1-207ENST00000466846 SOGA1O94964 1423 aa5.94□□□□□ -1.46
PAXBP1-207ENST00000466846 EEA1Q15075 1411 aa5.94□□□□□ -1.46
PAXBP1-207ENST00000466846 ATF5Q9Y2D1 282 aaPredicted RBP5.93□□□□□ -1.46
PAXBP1-207ENST00000466846 PRXQ9BXM0 1461 aa5.92□□□□□ -1.46
PAXBP1-207ENST00000466846 RNF39Q9H2S5 420 aa5.91□□□□□ -1.46
PAXBP1-207ENST00000466846 THOC2Q8NI27 1593 aaKnown RBP5.9□□□□□ -1.46
PAXBP1-207ENST00000466846 CTTNBP2Q8WZ74 1663 aa5.9□□□□□ -1.47
PAXBP1-207ENST00000466846 PBRM1Q86U86 1689 aa5.9□□□□□ -1.47
PAXBP1-207ENST00000466846 CADPSQ9ULU8 1353 aa5.89□□□□□ -1.47
PAXBP1-207ENST00000466846 LRRIQ1Q96JM4 1722 aa5.89□□□□□ -1.47
PAXBP1-207ENST00000466846 URB2Q14146 1524 aaKnown RBP5.89□□□□□ -1.47
PAXBP1-207ENST00000466846 ZNF219Q9P2Y4 722 aaPredicted RBP5.89□□□□□ -1.47
PAXBP1-207ENST00000466846 NESP48681 1621 aa5.88□□□□□ -1.47
PAXBP1-207ENST00000466846 CUL7Q14999 1698 aa5.88□□□□□ -1.47
PAXBP1-207ENST00000466846 ABCA10Q8WWZ4 1543 aa5.87□□□□□ -1.47
PAXBP1-207ENST00000466846 TOPBP1Q92547 1522 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms