Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 KRT18P16-201ENST00000510337 1294 ntBASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 AC139713.2-201ENST00000641328 2723 ntBASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 BCL2-203ENST00000589955 5011 ntBASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV26-1A0A087WT03 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV26-1A0A087WT03 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAV26-1A0A087WT03 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAV26-1A0A087WT03 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV26-1A0A087WT03 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.71□□□□□ -0.22
TRAV26-1A0A087WT03 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV26-1A0A087WT03 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV26-1A0A087WT03 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV26-1A0A087WT03 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV26-1A0A087WT03 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 HTR7P1-201ENST00000538670 1336 ntBASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV26-1A0A087WT03 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV26-1A0A087WT03 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV26-1A0A087WT03 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV26-1A0A087WT03 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV26-1A0A087WT03 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV26-1A0A087WT03 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV26-1A0A087WT03 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV26-1A0A087WT03 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV26-1A0A087WT03 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV26-1A0A087WT03 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV26-1A0A087WT03 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV26-1A0A087WT03 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV26-1A0A087WT03 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV26-1A0A087WT03 BID-204ENST00000399767 2129 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV26-1A0A087WT03 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV26-1A0A087WT03 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms