Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP4S1Q9Y587 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 AC008406.3-201ENST00000620001 1374 ntBASIC17.92■□□□□ 0.46
AP4S1Q9Y587 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 C2orf69P4-201ENST00000565394 541 ntBASIC17.92■□□□□ 0.46
AP4S1Q9Y587 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.92■□□□□ 0.46
AP4S1Q9Y587 LINC00896-202ENST00000609602 2128 ntBASIC17.92■□□□□ 0.46
AP4S1Q9Y587 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 AC013268.1-206ENST00000638368 961 ntBASIC17.91■□□□□ 0.46
AP4S1Q9Y587 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 AC112229.1-201ENST00000639295 961 ntBASIC17.91■□□□□ 0.46
AP4S1Q9Y587 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
AP4S1Q9Y587 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms