Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 DUSP5P2-201ENST00000426873 1033 ntBASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 YBX1P10-201ENST00000444752 975 ntBASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 MIR4758-201ENST00000577688 71 ntBASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 AC104771.1-201ENST00000603335 964 ntBASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SMARCAL1Q9NZC9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 AL138781.1-201ENST00000566567 1274 ntBASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 AC092118.2-201ENST00000613495 667 ntBASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.96■□□□□ 0.79
SMARCAL1Q9NZC9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 HLA-L-209ENST00000420110 1011 ntBASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 ABALON-201ENST00000629058 1903 ntBASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 AIRN-201ENST00000601203 4374 ntBASIC19.95■□□□□ 0.78
SMARCAL1Q9NZC9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCAL1Q9NZC9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms