Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.11■□□□□ 0.172e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.02■□□□□ 0.162e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-220ENST00000468805 1721 ntTSL 1 (best)16.02■□□□□ 0.162e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-228ENST00000497805 1908 ntTSL 1 (best)15.15■□□□□ 0.022e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-219ENST00000467403 1661 ntTSL 1 (best)14.16□□□□□ -0.142e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.49□□□□□ -0.252e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.93□□□□□ -0.342e-9■■■□□ 17.7
CSTF2TQ9H0L4 AC102953.2-201ENST00000609755 3026 ntBASIC12.67□□□□□ -0.382e-7■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.61□□□□□ -0.392e-9■■■□□ 17.7
CSTF2TQ9H0L4 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC12.08□□□□□ -0.482e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-207ENST00000398224 1671 ntTSL 1 (best) BASIC11.3□□□□□ -0.62e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-210ENST00000398229 1684 ntTSL 1 (best) BASIC11.3□□□□□ -0.62e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-211ENST00000398232 1885 ntTSL 1 (best) BASIC11.06□□□□□ -0.642e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-204ENST00000335512 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.932e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-223ENST00000486902 794 ntTSL 28.68□□□□□ -1.022e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-222ENST00000472401 431 ntTSL 38.68□□□□□ -1.022e-9■■■□□ 17.7
CSTF2TQ9H0L4 LCOR-209ENST00000540664 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.022e-6■■■□□ 17.7
CSTF2TQ9H0L4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.742e-6■■■□□ 17.7
CSTF2TQ9H0L4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3□□□□□ -1.932e-6■■■□□ 17.7
CSTF2TQ9H0L4 TSC22D4-206ENST00000496728 837 ntTSL 318.79■□□□□ 0.62e-6■■■□□ 17.7
CSTF2TQ9H0L4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.96■□□□□ 0.311e-6■■■□□ 17.7
CSTF2TQ9H0L4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.021e-6■■■□□ 17.7
CSTF2TQ9H0L4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.091e-6■■■□□ 17.7
CSTF2TQ9H0L4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.31□□□□□ -0.121e-6■■■□□ 17.7
CSTF2TQ9H0L4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.32□□□□□ -0.281e-6■■■□□ 17.7
CSTF2TQ9H0L4 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC11.61□□□□□ -0.551e-6■■■□□ 17.7
CSTF2TQ9H0L4 SLC4A2-218ENST00000494125 782 ntTSL 222.83■■□□□ 1.251e-6■■■□□ 17.7
CSTF2TQ9H0L4 SLC4A2-213ENST00000483786 571 ntTSL 415.75■□□□□ 0.111e-6■■■□□ 17.7
CSTF2TQ9H0L4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 01e-6■■■□□ 17.7
CSTF2TQ9H0L4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.131e-6■■■□□ 17.7
CSTF2TQ9H0L4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.112e-6■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-234ENST00000492871 1065 ntTSL 324.22■■□□□ 1.472e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-215ENST00000462807 628 ntTSL 224.16■■□□□ 1.462e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-227ENST00000485083 871 ntTSL 323.64■■□□□ 1.372e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-235ENST00000493138 694 ntTSL 323.64■■□□□ 1.372e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.81■■□□□ 1.242e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.96■□□□□ 0.952e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.832e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-213ENST00000453943 656 ntTSL 1 (best)19.91■□□□□ 0.782e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.672e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.662e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-236ENST00000493209 735 ntTSL 518.27■□□□□ 0.522e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.55■□□□□ 0.42e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-230ENST00000485838 774 ntTSL 317.29■□□□□ 0.362e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 02e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-238ENST00000498092 865 ntTSL 514.28□□□□□ -0.122e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.14□□□□□ -0.152e-7■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-212ENST00000435153 865 ntTSL 311.67□□□□□ -0.542e-7■■■□□ 17.7
CSTF2TQ9H0L4 NR2C2-204ENST00000413118 564 ntTSL 419.32■□□□□ 0.681e-7■■■□□ 17.7
CSTF2TQ9H0L4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.221e-7■■■□□ 17.7
CSTF2TQ9H0L4 NR2C2-207ENST00000435454 495 ntTSL 315.79■□□□□ 0.121e-7■■■□□ 17.7
CSTF2TQ9H0L4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.94□□□□□ -0.021e-7■■■□□ 17.7
CSTF2TQ9H0L4 MCF2L-225ENST00000480321 5727 ntTSL 1 (best)12.99□□□□□ -0.334e-6■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-211ENST00000412265 1012 ntTSL 512.6□□□□□ -0.392e-8■■■□□ 17.7
CSTF2TQ9H0L4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.54■■□□□ 1.26e-9■■■□□ 17.7
CSTF2TQ9H0L4 TFEB-210ENST00000419574 984 ntTSL 317.1■□□□□ 0.335e-7■■■□□ 17.7
CSTF2TQ9H0L4 TFEB-215ENST00000445214 365 ntTSL 516.21■□□□□ 0.195e-7■■■□□ 17.7
CSTF2TQ9H0L4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.763e-10■■■□□ 17.7
CSTF2TQ9H0L4 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC9.97□□□□□ -0.813e-10■■■□□ 17.7
CSTF2TQ9H0L4 LYPLA2-207ENST00000421070 429 ntTSL 514.07□□□□□ -0.168e-9■■■□□ 17.7
CSTF2TQ9H0L4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.68■■□□□ 1.542e-8■■■□□ 17.7
CSTF2TQ9H0L4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.65■■□□□ 1.382e-8■■■□□ 17.7
CSTF2TQ9H0L4 UBALD1-204ENST00000588691 281 ntTSL 322.25■■□□□ 1.152e-8■■■□□ 17.7
CSTF2TQ9H0L4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.89■■□□□ 1.092e-8■■■□□ 17.7
CSTF2TQ9H0L4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.012e-8■■■□□ 17.7
CSTF2TQ9H0L4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.27■□□□□ 0.842e-8■■■□□ 17.7
CSTF2TQ9H0L4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.6■□□□□ 0.572e-8■■■□□ 17.7
CSTF2TQ9H0L4 ASPSCR1-210ENST00000581608 2387 ntTSL 218.75■□□□□ 0.592e-21■■■□□ 17.7
CSTF2TQ9H0L4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.56□□□□□ -0.241e-6■■■□□ 17.7
CSTF2TQ9H0L4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.311e-6■■■□□ 17.7
CSTF2TQ9H0L4 CORO7-227ENST00000575714 2978 ntTSL 512.64□□□□□ -0.391e-6■■■□□ 17.7
CSTF2TQ9H0L4 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC11.54□□□□□ -0.561e-6■■■□□ 17.7
CSTF2TQ9H0L4 CORO7-208ENST00000571227 3578 ntTSL 511.52□□□□□ -0.561e-6■■■□□ 17.7
CSTF2TQ9H0L4 SMAD2-208ENST00000587269 1042 ntTSL 327.95■■■□□ 2.069e-7■■■□□ 17.7
CSTF2TQ9H0L4 IRF3-220ENST00000598108 1118 ntTSL 321.27■■□□□ 13e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.48■□□□□ 0.873e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.29■□□□□ 0.843e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.69■□□□□ 0.583e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.3■□□□□ 0.523e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-209ENST00000595034 739 ntTSL 317.52■□□□□ 0.43e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-205ENST00000593337 633 ntTSL 316.97■□□□□ 0.313e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.81■□□□□ 0.283e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-216ENST00000597180 301 ntTSL 516.81■□□□□ 0.283e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-208ENST00000594387 800 ntTSL 316.34■□□□□ 0.213e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.23e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-230ENST00000601809 768 ntTSL 216.29■□□□□ 0.23e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.033e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-219ENST00000597636 2874 ntTSL 514.8□□□□□ -0.043e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-226ENST00000600453 700 ntTSL 314.75□□□□□ -0.053e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.88□□□□□ -0.193e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.51□□□□□ -0.253e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC12.94□□□□□ -0.343e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-229ENST00000601373 680 ntTSL 212.31□□□□□ -0.443e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC12.15□□□□□ -0.463e-7■■■□□ 17.6
CSTF2TQ9H0L4 IRF3-206ENST00000593818 924 ntTSL 211.6□□□□□ -0.553e-7■■■□□ 17.6
CSTF2TQ9H0L4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.35■□□□□ 0.859e-7■■■□□ 17.6
CSTF2TQ9H0L4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.34■□□□□ 0.699e-7■■■□□ 17.6
CSTF2TQ9H0L4 TBC1D22A-204ENST00000394449 2048 ntTSL 519.27■□□□□ 0.689e-7■■■□□ 17.6
CSTF2TQ9H0L4 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.259e-7■■■□□ 17.6
CSTF2TQ9H0L4 TBC1D22A-207ENST00000441162 2636 ntTSL 212.73□□□□□ -0.379e-7■■■□□ 17.6
Retrieved 100 of 19,151 protein–RNA pairs in 118 ms