RNA–Protein interactions for RNA: ENST00000486902.5

PDE9A-223, Transcript of phosphodiesterase 9A, humanhuman

TSL 2

Gene PDE9A, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-223ENST00000486902 AEBP2Q6ZN18 517 aaPredicted RBP24.29■■□□□ 1.48
PDE9A-223ENST00000486902 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.37
PDE9A-223ENST00000486902 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
PDE9A-223ENST00000486902 ABCC9O60706 1549 aa22.35■■□□□ 1.17
PDE9A-223ENST00000486902 DNAJC5BQ9UF47 199 aa21.68■■□□□ 1.06
PDE9A-223ENST00000486902 CCDC180Q9P1Z9 1646 aa21.49■■□□□ 1.03
PDE9A-223ENST00000486902 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
PDE9A-223ENST00000486902 PABPN1Q86U42 306 aaKnown RBP eCLIP20.7■□□□□ 0.9
PDE9A-223ENST00000486902 SENP3Q9H4L4 574 aaPredicted RBP20.64■□□□□ 0.89
PDE9A-223ENST00000486902 NACADO15069 1562 aa20.51■□□□□ 0.87
PDE9A-223ENST00000486902 PHF23Q9BUL5 403 aaPredicted RBP20.46■□□□□ 0.87
PDE9A-223ENST00000486902 DNAJC5Q9H3Z4 198 aa20.41■□□□□ 0.86
PDE9A-223ENST00000486902 UNC13AQ9UPW8 1703 aa20.36■□□□□ 0.85
PDE9A-223ENST00000486902 BICRAQ9NZM4 1560 aa20.33■□□□□ 0.84
PDE9A-223ENST00000486902 DCAF8L2P0C7V8 631 aa20.3■□□□□ 0.84
PDE9A-223ENST00000486902 CECR2Q9BXF3 1484 aa20.18■□□□□ 0.82
PDE9A-223ENST00000486902 CC2D2AQ9P2K1 1620 aa20.1■□□□□ 0.81
PDE9A-223ENST00000486902 MYO15BQ96JP2 1530 aa19.96■□□□□ 0.79
PDE9A-223ENST00000486902 SHROOM4Q9ULL8 1493 aa19.9■□□□□ 0.78
PDE9A-223ENST00000486902 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
PDE9A-223ENST00000486902 SCRIBQ14160 1630 aa19.62■□□□□ 0.73
PDE9A-223ENST00000486902 CUX2O14529 1486 aa19.52■□□□□ 0.72
PDE9A-223ENST00000486902 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
PDE9A-223ENST00000486902 DCAF1Q9Y4B6 1507 aa19.44■□□□□ 0.7
PDE9A-223ENST00000486902 ERCC6Q03468 1493 aa19.32■□□□□ 0.68
PDE9A-223ENST00000486902 FOXD1Q16676 465 aa19.26■□□□□ 0.67
PDE9A-223ENST00000486902 TRIM41Q8WV44 630 aa19.23■□□□□ 0.67
PDE9A-223ENST00000486902 NESP48681 1621 aa18.99■□□□□ 0.63
PDE9A-223ENST00000486902 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
PDE9A-223ENST00000486902 THOC2Q8NI27 1593 aaKnown RBP18.91■□□□□ 0.62
PDE9A-223ENST00000486902 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
PDE9A-223ENST00000486902 SMARCA2P51531 1590 aa18.78■□□□□ 0.6
PDE9A-223ENST00000486902 HMGXB3Q12766 1538 aa18.76■□□□□ 0.59
PDE9A-223ENST00000486902 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
PDE9A-223ENST00000486902 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.58
PDE9A-223ENST00000486902 PLPPR3Q6T4P5 718 aa18.62■□□□□ 0.57
PDE9A-223ENST00000486902 SMARCA4P51532 1647 aa18.6■□□□□ 0.57
PDE9A-223ENST00000486902 BAZ1BQ9UIG0 1483 aaKnown RBP18.59■□□□□ 0.57
PDE9A-223ENST00000486902 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
PDE9A-223ENST00000486902 BAZ1AQ9NRL2 1556 aaPredicted RBP18.55■□□□□ 0.56
PDE9A-223ENST00000486902 MRC2Q9UBG0 1479 aa18.5■□□□□ 0.55
PDE9A-223ENST00000486902 OSCARQ8IYS5 282 aa18.49■□□□□ 0.55
PDE9A-223ENST00000486902 WDR62O43379 1518 aa18.46■□□□□ 0.55
PDE9A-223ENST00000486902 PEG3Q9GZU2 1588 aa18.4■□□□□ 0.54
PDE9A-223ENST00000486902 CADPSQ9ULU8 1353 aa18.37■□□□□ 0.53
PDE9A-223ENST00000486902 RIMBP3CA6NJZ7 1639 aa18.37■□□□□ 0.53
PDE9A-223ENST00000486902 RIMBP3BA6NNM3 1639 aa18.37■□□□□ 0.53
PDE9A-223ENST00000486902 RIMBP3Q9UFD9 1639 aa18.37■□□□□ 0.53
PDE9A-223ENST00000486902 CEP164Q9UPV0 1460 aa18.26■□□□□ 0.51
PDE9A-223ENST00000486902 ARHGEF11O15085 1522 aa18.24■□□□□ 0.51
PDE9A-223ENST00000486902 MROH2BQ7Z745 1585 aa18.24■□□□□ 0.51
PDE9A-223ENST00000486902 TRHP20396 242 aaPredicted RBP18.19■□□□□ 0.5
PDE9A-223ENST00000486902 PPP6R1Q9UPN7 881 aa18.18■□□□□ 0.5
PDE9A-223ENST00000486902 FANCD2Q9BXW9 1451 aa18.18■□□□□ 0.5
PDE9A-223ENST00000486902 ADRA2BP18089 450 aa18.15■□□□□ 0.5
PDE9A-223ENST00000486902 CYB5RLQ6IPT4 315 aa18.15■□□□□ 0.5
PDE9A-223ENST00000486902 URB2Q14146 1524 aaKnown RBP18.11■□□□□ 0.49
PDE9A-223ENST00000486902 ARAP1Q96P48 1450 aa18.04■□□□□ 0.48
PDE9A-223ENST00000486902 PIAS4Q8N2W9 510 aaPredicted RBP18.04■□□□□ 0.48
PDE9A-223ENST00000486902 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
PDE9A-223ENST00000486902 CFTRP13569 1480 aa18.01■□□□□ 0.47
PDE9A-223ENST00000486902 WIZO95785 1651 aa17.96■□□□□ 0.47
PDE9A-223ENST00000486902 IFT140Q96RY7 1462 aa17.91■□□□□ 0.46
PDE9A-223ENST00000486902 MSH5O43196 834 aa17.9■□□□□ 0.46
PDE9A-223ENST00000486902 EIF4G3O43432 1585 aaKnown RBP17.84■□□□□ 0.45
PDE9A-223ENST00000486902 RSF1Q96T23 1441 aaPredicted RBP17.84■□□□□ 0.45
PDE9A-223ENST00000486902 CHD1O14646 1710 aa17.83■□□□□ 0.44
PDE9A-223ENST00000486902 FBLN2P98095 1184 aa17.76■□□□□ 0.43
PDE9A-223ENST00000486902 TOPBP1Q92547 1522 aa17.75■□□□□ 0.43
PDE9A-223ENST00000486902 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.43
PDE9A-223ENST00000486902 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
PDE9A-223ENST00000486902 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
PDE9A-223ENST00000486902 TARBP1Q13395 1621 aaKnown RBP17.64■□□□□ 0.41
PDE9A-223ENST00000486902 CLASP1Q7Z460 1538 aa17.63■□□□□ 0.41
PDE9A-223ENST00000486902 DNMBPQ6XZF7 1577 aa17.6■□□□□ 0.41
PDE9A-223ENST00000486902 ILDR1Q86SU0 546 aaPredicted RBP17.59■□□□□ 0.41
PDE9A-223ENST00000486902 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
PDE9A-223ENST00000486902 SNAPC4Q5SXM2 1469 aa17.54■□□□□ 0.4
PDE9A-223ENST00000486902 POLA1P09884 1462 aaPredicted RBP17.53■□□□□ 0.4
PDE9A-223ENST00000486902 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.39
PDE9A-223ENST00000486902 GAPVD1Q14C86 1478 aa17.51■□□□□ 0.39
PDE9A-223ENST00000486902 SYNJ1O43426 1573 aa17.51■□□□□ 0.39
PDE9A-223ENST00000486902 CCDC88BA6NC98 1476 aa17.5■□□□□ 0.39
PDE9A-223ENST00000486902 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
PDE9A-223ENST00000486902 CHMP7Q8WUX9 453 aaPredicted RBP17.48■□□□□ 0.39
PDE9A-223ENST00000486902 SOGA1O94964 1423 aa17.41■□□□□ 0.38
PDE9A-223ENST00000486902 MAGI1Q96QZ7 1491 aaPredicted RBP17.41■□□□□ 0.38
PDE9A-223ENST00000486902 SYNJ2O15056 1496 aa17.38■□□□□ 0.37
PDE9A-223ENST00000486902 GRIN2BQ13224 1484 aa17.35■□□□□ 0.37
PDE9A-223ENST00000486902 ERCC6L2Q5T890 1561 aa17.35■□□□□ 0.37
PDE9A-223ENST00000486902 WDR97A6NE52 1622 aa17.33■□□□□ 0.37
PDE9A-223ENST00000486902 KDM4FA0A1W2PPD8 638 aa17.32■□□□□ 0.36
PDE9A-223ENST00000486902 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
PDE9A-223ENST00000486902 KIF13AQ9H1H9 1805 aa17.28■□□□□ 0.36
PDE9A-223ENST00000486902 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
PDE9A-223ENST00000486902 CEP170Q5SW79 1584 aa17.2■□□□□ 0.34
PDE9A-223ENST00000486902 PBRM1Q86U86 1689 aa17.2■□□□□ 0.34
PDE9A-223ENST00000486902 CUX1P39880 1505 aa17.18■□□□□ 0.34
PDE9A-223ENST00000486902 FAM69CQ0P6D2 419 aa17.15■□□□□ 0.34
PDE9A-223ENST00000486902 GRIN2AQ12879 1464 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms