RNA–Protein interactions for RNA: ENST00000398224.3

PDE9A-207, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-207ENST00000398224 PELP1Q8IZL8 1130 aaKnown RBP20.09■□□□□ 0.81
PDE9A-207ENST00000398224 MYT1Q01538 1121 aa19.79■□□□□ 0.76
PDE9A-207ENST00000398224 TTBK1Q5TCY1 1321 aaPredicted RBP18.99■□□□□ 0.63
PDE9A-207ENST00000398224 HRCP23327 699 aa18.95■□□□□ 0.62
PDE9A-207ENST00000398224 NISCHQ9Y2I1 1504 aa18.53■□□□□ 0.56
PDE9A-207ENST00000398224 SCAF1Q9H7N4 1312 aaKnown RBP18.19■□□□□ 0.5
PDE9A-207ENST00000398224 PPARGC1BQ86YN6 1023 aaKnown RBP17.95■□□□□ 0.46
PDE9A-207ENST00000398224 ERICH6Q7L0X2 663 aa17.79■□□□□ 0.44
PDE9A-207ENST00000398224 ZEB1P37275 1124 aaPredicted RBP17.78■□□□□ 0.44
PDE9A-207ENST00000398224 PCGF6Q9BYE7 350 aa17.74■□□□□ 0.43
PDE9A-207ENST00000398224 PRKCSHP14314 528 aaPredicted RBP17.71■□□□□ 0.42
PDE9A-207ENST00000398224 DCAF1Q9Y4B6 1507 aa17.69■□□□□ 0.42
PDE9A-207ENST00000398224 BCL11AQ9H165 835 aa17.68■□□□□ 0.42
PDE9A-207ENST00000398224 CENPBP07199 599 aaPredicted RBP17.67■□□□□ 0.42
PDE9A-207ENST00000398224 ACIN1Q9UKV3 1341 aaKnown RBP17.67■□□□□ 0.42
PDE9A-207ENST00000398224 CCDC180Q9P1Z9 1646 aa17.67■□□□□ 0.42
PDE9A-207ENST00000398224 APLP2Q06481 763 aa17.56■□□□□ 0.4
PDE9A-207ENST00000398224 MYO15BQ96JP2 1530 aa17.55■□□□□ 0.4
PDE9A-207ENST00000398224 FAM9AQ8IZU1 332 aaPredicted RBP17.39■□□□□ 0.37
PDE9A-207ENST00000398224 GTF3C3Q9Y5Q9 886 aa17.36■□□□□ 0.37
PDE9A-207ENST00000398224 NEUROD1Q13562 356 aa17.35■□□□□ 0.37
PDE9A-207ENST00000398224 TRIM26Q12899 539 aaPredicted RBP17.34■□□□□ 0.37
PDE9A-207ENST00000398224 ANP32EQ9BTT0 268 aa17.23■□□□□ 0.35
PDE9A-207ENST00000398224 CLSPNQ9HAW4 1339 aa17.04■□□□□ 0.32
PDE9A-207ENST00000398224 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
PDE9A-207ENST00000398224 SLC24A1O60721 1099 aa16.82■□□□□ 0.28
PDE9A-207ENST00000398224 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
PDE9A-207ENST00000398224 DIEXFQ68CQ4 756 aaKnown RBP16.79■□□□□ 0.28
PDE9A-207ENST00000398224 MYT1LQ9UL68 1186 aa16.68■□□□□ 0.26
PDE9A-207ENST00000398224 SUPT5HO00267 1087 aaKnown RBP16.62■□□□□ 0.25
PDE9A-207ENST00000398224 TSHZ2Q9NRE2 1034 aa16.6■□□□□ 0.25
PDE9A-207ENST00000398224 TRIM41Q8WV44 630 aa16.58■□□□□ 0.24
PDE9A-207ENST00000398224 UBE2Q2Q8WVN8 375 aa16.55■□□□□ 0.24
PDE9A-207ENST00000398224 DAXXQ9UER7 740 aaPredicted RBP16.54■□□□□ 0.24
PDE9A-207ENST00000398224 ERICH6BQ5W0A0 696 aa16.51■□□□□ 0.23
PDE9A-207ENST00000398224 SUPT16HQ9Y5B9 1047 aaKnown RBP16.44■□□□□ 0.22
PDE9A-207ENST00000398224 EIF5BO60841 1220 aaKnown RBP16.4■□□□□ 0.22
PDE9A-207ENST00000398224 ZNF316A6NFI3 1004 aaPredicted RBP16.37■□□□□ 0.21
PDE9A-207ENST00000398224 LOC105371045A0A1W2PR82 267 aa16.35■□□□□ 0.21
PDE9A-207ENST00000398224 AEBP2Q6ZN18 517 aaPredicted RBP16.34■□□□□ 0.21
PDE9A-207ENST00000398224 CCER1Q8TC90 406 aaPredicted RBP16.28■□□□□ 0.2
PDE9A-207ENST00000398224 ANO8Q9HCE9 1232 aaPredicted RBP16.27■□□□□ 0.2
PDE9A-207ENST00000398224 SHROOM4Q9ULL8 1493 aa16.27■□□□□ 0.2
PDE9A-207ENST00000398224 YTHDC1Q96MU7 727 aaKnown RBP16.24■□□□□ 0.19
PDE9A-207ENST00000398224 FANCIQ9NVI1 1328 aa16.17■□□□□ 0.18
PDE9A-207ENST00000398224 MIER1Q8N108 512 aa16.14■□□□□ 0.18
PDE9A-207ENST00000398224 RBM19Q9Y4C8 960 aaKnown RBP16.12■□□□□ 0.17
PDE9A-207ENST00000398224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.17
PDE9A-207ENST00000398224 DEKP35659 375 aaKnown RBP16.07■□□□□ 0.16
PDE9A-207ENST00000398224 SALL2Q9Y467 1007 aaPredicted RBP16.02■□□□□ 0.16
PDE9A-207ENST00000398224 PKNOX2Q96KN3 472 aa16.02■□□□□ 0.15
PDE9A-207ENST00000398224 MSH5O43196 834 aa15.97■□□□□ 0.15
PDE9A-207ENST00000398224 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
PDE9A-207ENST00000398224 PODXL2Q9NZ53 605 aa15.82■□□□□ 0.12
PDE9A-207ENST00000398224 WRNQ14191 1432 aaPredicted RBP eCLIP15.78■□□□□ 0.12
PDE9A-207ENST00000398224 GLIPR1L2Q4G1C9 344 aa15.76■□□□□ 0.11
PDE9A-207ENST00000398224 CCDC136Q96JN2 1154 aa15.76■□□□□ 0.11
PDE9A-207ENST00000398224 NEFLP07196 543 aa15.76■□□□□ 0.11
PDE9A-207ENST00000398224 ABCC9O60706 1549 aa15.74■□□□□ 0.11
PDE9A-207ENST00000398224 C11orf95C9JLR9 678 aaPredicted RBP15.69■□□□□ 0.1
PDE9A-207ENST00000398224 FKBP8Q14318 412 aa15.69■□□□□ 0.1
PDE9A-207ENST00000398224 PLEKHG5O94827 1062 aa15.66■□□□□ 0.1
PDE9A-207ENST00000398224 CDK11AQ9UQ88 783 aaPredicted RBP15.65■□□□□ 0.1
PDE9A-207ENST00000398224 RSPH6AQ9H0K4 717 aa15.6■□□□□ 0.09
PDE9A-207ENST00000398224 RTL5Q5HYW3 569 aaPredicted RBP15.6■□□□□ 0.09
PDE9A-207ENST00000398224 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.59■□□□□ 0.09
PDE9A-207ENST00000398224 NOP58Q9Y2X3 529 aaKnown RBP15.59■□□□□ 0.09
PDE9A-207ENST00000398224 DCAF8L2P0C7V8 631 aa15.58■□□□□ 0.08
PDE9A-207ENST00000398224 IL27Q8NEV9 243 aa15.57■□□□□ 0.08
PDE9A-207ENST00000398224 BCANQ96GW7 911 aa15.57■□□□□ 0.08
PDE9A-207ENST00000398224 USP35Q9P2H5 1018 aa15.52■□□□□ 0.08
PDE9A-207ENST00000398224 WASHC2AQ641Q2 1341 aa15.51■□□□□ 0.07
PDE9A-207ENST00000398224 WASHC2CQ9Y4E1 1318 aa15.5■□□□□ 0.07
PDE9A-207ENST00000398224 ZMYND15Q9H091 742 aa15.43■□□□□ 0.06
PDE9A-207ENST00000398224 NBR1Q14596 966 aa15.38■□□□□ 0.05
PDE9A-207ENST00000398224 RTN4Q9NQC3 1192 aaKnown RBP15.37■□□□□ 0.05
PDE9A-207ENST00000398224 ITGAEP38570 1179 aa15.36■□□□□ 0.05
PDE9A-207ENST00000398224 CCER2I3L3R5 266 aa15.34■□□□□ 0.05
PDE9A-207ENST00000398224 EEA1Q15075 1411 aa15.32■□□□□ 0.04
PDE9A-207ENST00000398224 FAM43AQ8N2R8 423 aa15.32■□□□□ 0.04
PDE9A-207ENST00000398224 IPO9Q96P70 1041 aaKnown RBP15.32■□□□□ 0.04
PDE9A-207ENST00000398224 VSIG10Q8N0Z9 540 aa15.29■□□□□ 0.04
PDE9A-207ENST00000398224 PPP4R2Q9NY27 417 aa15.29■□□□□ 0.04
PDE9A-207ENST00000398224 ANP32AP39687 249 aaKnown RBP15.28■□□□□ 0.04
PDE9A-207ENST00000398224 FGD1P98174 961 aa15.28■□□□□ 0.04
PDE9A-207ENST00000398224 RRP9O43818 475 aaKnown RBP15.26■□□□□ 0.03
PDE9A-207ENST00000398224 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
PDE9A-207ENST00000398224 RB1CC1Q8TDY2 1594 aa15.26■□□□□ 0.03
PDE9A-207ENST00000398224 PDE4CQ08493 712 aa15.25■□□□□ 0.03
PDE9A-207ENST00000398224 ZBTB47Q9UFB7 747 aaPredicted RBP15.25■□□□□ 0.03
PDE9A-207ENST00000398224 PPM1GO15355 546 aaPredicted RBP15.22■□□□□ 0.03
PDE9A-207ENST00000398224 AAMPQ13685 434 aa15.22■□□□□ 0.03
PDE9A-207ENST00000398224 CEP162Q5TB80 1403 aa15.22■□□□□ 0.03
PDE9A-207ENST00000398224 PDIA4P13667 645 aaKnown RBP15.19■□□□□ 0.02
PDE9A-207ENST00000398224 TNIKQ9UKE5 1360 aa15.18■□□□□ 0.02
PDE9A-207ENST00000398224 NEFMP07197 916 aa15.17■□□□□ 0.02
PDE9A-207ENST00000398224 NACADO15069 1562 aa15.16■□□□□ 0.02
PDE9A-207ENST00000398224 DHX57Q6P158 1386 aaKnown RBP15.15■□□□□ 0.02
PDE9A-207ENST00000398224 RBM10P98175 930 aaKnown RBP15.13■□□□□ 0.01
PDE9A-207ENST00000398224 GSE1Q14687 1217 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms