Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 ABALON-201ENST00000629058 1903 ntBASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 AL512625.2-201ENST00000417533 625 ntBASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 AC073210.2-201ENST00000430369 194 ntBASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 YBX1P10-201ENST00000444752 975 ntBASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC71LQ8N9Z2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 PCDHB18P-201ENST00000524813 2368 ntBASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 AC007322.1-201ENST00000426983 750 ntBASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 CROCCP1-201ENST00000426910 5675 ntBASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71LQ8N9Z2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 AC011767.1-201ENST00000617410 1153 ntBASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
CCDC71LQ8N9Z2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC71LQ8N9Z2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC71LQ8N9Z2 AL133373.2-201ENST00000623187 2828 ntBASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms