Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 MAX-217ENST00000557277 728 ntTSL 3 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 RAP2CP1-201ENST00000605103 478 ntBASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 SERPINH1P1-201ENST00000419794 1249 ntBASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 AC133552.2-202ENST00000575694 574 ntBASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 AL121906.2-201ENST00000621597 723 ntBASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 AC006557.6-201ENST00000623071 864 ntBASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 AC126763.1-201ENST00000552015 2118 ntBASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 AC020916.1-201ENST00000587762 1774 ntBASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00242Q5T6M2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 AL162741.1-201ENST00000565563 1558 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms