Protein–RNA interactions for Protein: P23368

ME2, NAD-dependent malic enzyme, mitochondrial, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME2P23368 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ME2P23368 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.31■□□□□ 0.52
ME2P23368 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ME2P23368 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ME2P23368 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.31■□□□□ 0.52
ME2P23368 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.31■□□□□ 0.52
ME2P23368 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.31■□□□□ 0.52
ME2P23368 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ME2P23368 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ME2P23368 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.31■□□□□ 0.52
ME2P23368 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.31■□□□□ 0.52
ME2P23368 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ME2P23368 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ME2P23368 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ME2P23368 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ME2P23368 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ME2P23368 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.31■□□□□ 0.52
ME2P23368 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.3■□□□□ 0.52
ME2P23368 AC116351.2-201ENST00000606540 1585 ntBASIC18.3■□□□□ 0.52
ME2P23368 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ME2P23368 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.3■□□□□ 0.52
ME2P23368 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.3■□□□□ 0.52
ME2P23368 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.3■□□□□ 0.52
ME2P23368 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.3■□□□□ 0.52
ME2P23368 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.3■□□□□ 0.52
ME2P23368 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.3■□□□□ 0.52
ME2P23368 AC091874.3-201ENST00000512672 1195 ntBASIC18.3■□□□□ 0.52
ME2P23368 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
ME2P23368 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
ME2P23368 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.3■□□□□ 0.52
ME2P23368 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ME2P23368 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ME2P23368 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ME2P23368 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ME2P23368 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ME2P23368 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ME2P23368 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.29■□□□□ 0.52
ME2P23368 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ME2P23368 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ME2P23368 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
ME2P23368 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.29■□□□□ 0.52
ME2P23368 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ME2P23368 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ME2P23368 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.29■□□□□ 0.52
ME2P23368 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ME2P23368 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.29■□□□□ 0.52
ME2P23368 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.29■□□□□ 0.52
ME2P23368 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.29■□□□□ 0.52
ME2P23368 C2orf69P4-201ENST00000565394 541 ntBASIC18.29■□□□□ 0.52
ME2P23368 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ME2P23368 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.29■□□□□ 0.52
ME2P23368 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ME2P23368 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.29■□□□□ 0.52
ME2P23368 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.29■□□□□ 0.52
ME2P23368 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ME2P23368 ANO7L1-203ENST00000602586 1720 ntBASIC18.29■□□□□ 0.52
ME2P23368 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ME2P23368 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ME2P23368 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ME2P23368 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ME2P23368 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ME2P23368 AC067852.2-201ENST00000590513 2313 ntBASIC18.28■□□□□ 0.52
ME2P23368 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.28■□□□□ 0.52
ME2P23368 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.28■□□□□ 0.52
ME2P23368 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ME2P23368 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ME2P23368 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ME2P23368 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ME2P23368 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ME2P23368 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.28■□□□□ 0.52
ME2P23368 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ME2P23368 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.28■□□□□ 0.52
ME2P23368 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.28■□□□□ 0.52
ME2P23368 AC098934.4-201ENST00000564127 592 ntBASIC18.28■□□□□ 0.52
ME2P23368 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.28■□□□□ 0.52
ME2P23368 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.28■□□□□ 0.52
ME2P23368 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ME2P23368 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ME2P23368 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
ME2P23368 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ME2P23368 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ME2P23368 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ME2P23368 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ME2P23368 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms