Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATF4P18848 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATF4P18848 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.85■□□□□ 0.13
ATF4P18848 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
ATF4P18848 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.85■□□□□ 0.13
ATF4P18848 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATF4P18848 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATF4P18848 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATF4P18848 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATF4P18848 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.85■□□□□ 0.13
ATF4P18848 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ATF4P18848 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ATF4P18848 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ATF4P18848 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
ATF4P18848 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATF4P18848 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATF4P18848 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
ATF4P18848 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.85■□□□□ 0.13
ATF4P18848 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.85■□□□□ 0.13
ATF4P18848 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.85■□□□□ 0.13
ATF4P18848 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATF4P18848 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATF4P18848 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.85■□□□□ 0.13
ATF4P18848 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATF4P18848 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.85■□□□□ 0.13
ATF4P18848 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.85■□□□□ 0.13
ATF4P18848 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.85■□□□□ 0.13
ATF4P18848 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
ATF4P18848 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATF4P18848 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATF4P18848 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATF4P18848 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATF4P18848 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.84■□□□□ 0.13
ATF4P18848 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.84■□□□□ 0.13
ATF4P18848 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
ATF4P18848 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
ATF4P18848 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
ATF4P18848 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
ATF4P18848 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
ATF4P18848 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.84■□□□□ 0.13
ATF4P18848 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.84■□□□□ 0.13
ATF4P18848 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.84■□□□□ 0.13
ATF4P18848 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.84■□□□□ 0.13
ATF4P18848 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.84■□□□□ 0.13
ATF4P18848 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.84■□□□□ 0.13
ATF4P18848 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.84■□□□□ 0.13
ATF4P18848 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
ATF4P18848 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.84■□□□□ 0.13
ATF4P18848 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.84■□□□□ 0.13
ATF4P18848 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 AP004607.4-201ENST00000530158 1459 ntBASIC15.84■□□□□ 0.13
ATF4P18848 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATF4P18848 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATF4P18848 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATF4P18848 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
ATF4P18848 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ATF4P18848 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.83■□□□□ 0.13
ATF4P18848 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATF4P18848 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ATF4P18848 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.13
ATF4P18848 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATF4P18848 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATF4P18848 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
ATF4P18848 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.83■□□□□ 0.12
ATF4P18848 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATF4P18848 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATF4P18848 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATF4P18848 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
ATF4P18848 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.83■□□□□ 0.12
ATF4P18848 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATF4P18848 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.83■□□□□ 0.12
ATF4P18848 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.83■□□□□ 0.12
ATF4P18848 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATF4P18848 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.83■□□□□ 0.12
ATF4P18848 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
ATF4P18848 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.83■□□□□ 0.12
ATF4P18848 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATF4P18848 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATF4P18848 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
ATF4P18848 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
ATF4P18848 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.83■□□□□ 0.12
ATF4P18848 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.83■□□□□ 0.12
ATF4P18848 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.83■□□□□ 0.12
ATF4P18848 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATF4P18848 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms