Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT2A6NDA9 TSPY15P-201ENST00000457163 923 ntBASIC18.05■□□□□ 0.48
LRIT2A6NDA9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.05■□□□□ 0.48
LRIT2A6NDA9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.05■□□□□ 0.48
LRIT2A6NDA9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT2A6NDA9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT2A6NDA9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT2A6NDA9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT2A6NDA9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.05■□□□□ 0.48
LRIT2A6NDA9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT2A6NDA9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT2A6NDA9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.05■□□□□ 0.48
LRIT2A6NDA9 KRT8P3-201ENST00000519669 1449 ntBASIC18.05■□□□□ 0.48
LRIT2A6NDA9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.05■□□□□ 0.48
LRIT2A6NDA9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT2A6NDA9 TNXA-203ENST00000507684 2038 ntBASIC18.05■□□□□ 0.48
LRIT2A6NDA9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT2A6NDA9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 FITM1-202ENST00000559294 800 ntBASIC18.04■□□□□ 0.48
LRIT2A6NDA9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.04■□□□□ 0.48
LRIT2A6NDA9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.03■□□□□ 0.48
LRIT2A6NDA9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRIT2A6NDA9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LRIT2A6NDA9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT2A6NDA9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT2A6NDA9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
LRIT2A6NDA9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT2A6NDA9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT2A6NDA9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
LRIT2A6NDA9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LRIT2A6NDA9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT2A6NDA9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.02■□□□□ 0.48
LRIT2A6NDA9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT2A6NDA9 MIR1238-201ENST00000408483 83 ntBASIC18.02■□□□□ 0.48
LRIT2A6NDA9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.02■□□□□ 0.48
LRIT2A6NDA9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT2A6NDA9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRIT2A6NDA9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.02■□□□□ 0.47
LRIT2A6NDA9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRIT2A6NDA9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRIT2A6NDA9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRIT2A6NDA9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRIT2A6NDA9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
LRIT2A6NDA9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
LRIT2A6NDA9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.01■□□□□ 0.47
LRIT2A6NDA9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.01■□□□□ 0.47
LRIT2A6NDA9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRIT2A6NDA9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRIT2A6NDA9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRIT2A6NDA9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRIT2A6NDA9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
LRIT2A6NDA9 AL390955.1-201ENST00000428694 934 ntBASIC18.01■□□□□ 0.47
LRIT2A6NDA9 CA15P1-201ENST00000481698 905 ntBASIC18.01■□□□□ 0.47
LRIT2A6NDA9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.01■□□□□ 0.47
LRIT2A6NDA9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
LRIT2A6NDA9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRIT2A6NDA9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms