Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 WIZP1-201ENST00000531444 2299 ntBASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 TFP1-202ENST00000475455 1573 ntBASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 MIR6821-201ENST00000617625 74 ntBASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 AC005332.8-201ENST00000622750 2735 ntBASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
TRAV13-1A0A0B4J241 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 IRX1P1-201ENST00000438849 1838 ntBASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-1A0A0B4J241 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms