Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRAV13-1A0A0B4J241 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TRAV13-1A0A0B4J241 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.78■■□□□ 1.24
TRAV13-1A0A0B4J241 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
TRAV13-1A0A0B4J241 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
TRAV13-1A0A0B4J241 HES6-203ENST00000409160 1600 ntTSL 2 BASIC22.46■■□□□ 1.19
TRAV13-1A0A0B4J241 AL356512.1-201ENST00000607453 1739 ntBASIC22.42■■□□□ 1.18
TRAV13-1A0A0B4J241 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC22.24■■□□□ 1.15
TRAV13-1A0A0B4J241 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
TRAV13-1A0A0B4J241 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRAV13-1A0A0B4J241 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRAV13-1A0A0B4J241 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC22.03■■□□□ 1.12
TRAV13-1A0A0B4J241 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRAV13-1A0A0B4J241 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
TRAV13-1A0A0B4J241 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.81■■□□□ 1.08
TRAV13-1A0A0B4J241 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV13-1A0A0B4J241 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV13-1A0A0B4J241 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
TRAV13-1A0A0B4J241 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV13-1A0A0B4J241 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TRAV13-1A0A0B4J241 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV13-1A0A0B4J241 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV13-1A0A0B4J241 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV13-1A0A0B4J241 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRAV13-1A0A0B4J241 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.35■■□□□ 1.01
TRAV13-1A0A0B4J241 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
TRAV13-1A0A0B4J241 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV13-1A0A0B4J241 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TRAV13-1A0A0B4J241 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRAV13-1A0A0B4J241 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
TRAV13-1A0A0B4J241 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV13-1A0A0B4J241 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC21■□□□□ 0.95
TRAV13-1A0A0B4J241 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
TRAV13-1A0A0B4J241 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV13-1A0A0B4J241 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.88■□□□□ 0.93
TRAV13-1A0A0B4J241 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV13-1A0A0B4J241 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV13-1A0A0B4J241 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC20.82■□□□□ 0.92
TRAV13-1A0A0B4J241 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV13-1A0A0B4J241 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV13-1A0A0B4J241 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV13-1A0A0B4J241 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV13-1A0A0B4J241 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRAV13-1A0A0B4J241 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV13-1A0A0B4J241 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV13-1A0A0B4J241 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV13-1A0A0B4J241 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAV13-1A0A0B4J241 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV13-1A0A0B4J241 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV13-1A0A0B4J241 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV13-1A0A0B4J241 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV13-1A0A0B4J241 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV13-1A0A0B4J241 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV13-1A0A0B4J241 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV13-1A0A0B4J241 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
TRAV13-1A0A0B4J241 ILK-212ENST00000532063 1617 ntTSL 2 BASIC20.45■□□□□ 0.86
TRAV13-1A0A0B4J241 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV13-1A0A0B4J241 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TRAV13-1A0A0B4J241 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC20.44■□□□□ 0.86
TRAV13-1A0A0B4J241 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV13-1A0A0B4J241 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC20.41■□□□□ 0.86
TRAV13-1A0A0B4J241 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV13-1A0A0B4J241 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV13-1A0A0B4J241 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC20.37■□□□□ 0.85
TRAV13-1A0A0B4J241 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV13-1A0A0B4J241 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRAV13-1A0A0B4J241 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV13-1A0A0B4J241 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV13-1A0A0B4J241 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV13-1A0A0B4J241 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRAV13-1A0A0B4J241 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
TRAV13-1A0A0B4J241 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAV13-1A0A0B4J241 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.22■□□□□ 0.83
TRAV13-1A0A0B4J241 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRAV13-1A0A0B4J241 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV13-1A0A0B4J241 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV13-1A0A0B4J241 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV13-1A0A0B4J241 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC20.13■□□□□ 0.81
TRAV13-1A0A0B4J241 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV13-1A0A0B4J241 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV13-1A0A0B4J241 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV13-1A0A0B4J241 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV13-1A0A0B4J241 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV13-1A0A0B4J241 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TRAV13-1A0A0B4J241 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV13-1A0A0B4J241 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV13-1A0A0B4J241 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
TRAV13-1A0A0B4J241 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
TRAV13-1A0A0B4J241 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV13-1A0A0B4J241 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV13-1A0A0B4J241 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRAV13-1A0A0B4J241 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRAV13-1A0A0B4J241 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.98■□□□□ 0.79
TRAV13-1A0A0B4J241 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV13-1A0A0B4J241 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAV13-1A0A0B4J241 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
TRAV13-1A0A0B4J241 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV13-1A0A0B4J241 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV13-1A0A0B4J241 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV13-1A0A0B4J241 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms