Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.9□□□□□ -0.19
HHLA3Q9XRX5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
HHLA3Q9XRX5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
HHLA3Q9XRX5 BCL2-203ENST00000589955 5011 ntBASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 UNC93B5-201ENST00000530315 699 ntBASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 AL121906.2-201ENST00000621597 723 ntBASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
HHLA3Q9XRX5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 TFP1-202ENST00000475455 1573 ntBASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 AC124283.5-201ENST00000624661 1809 ntBASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 KRT18P6-201ENST00000555540 1265 ntBASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HHLA3Q9XRX5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms